DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5916 and sgsm2

DIOPT Version :10

Sequence 1:NP_650524.1 Gene:CG5916 / 41960 FlyBaseID:FBgn0038401 Length:330 Species:Drosophila melanogaster
Sequence 2:XP_068069810.1 Gene:sgsm2 / 799094 ZFINID:ZDB-GENE-131119-52 Length:1057 Species:Danio rerio


Alignment Length:273 Identity:59/273 - (21%)
Similarity:118/273 - (43%) Gaps:62/273 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 KISGAAAAQRRSPDLFRNLLRTEPFDKEISDSISIDLPRTFPD------NIHF--DMKKQRLYNI 138
            |::..::::..:|..       ..:..|:.|:::::|.|...|      |.::  ....::|.||
Zfish   816 KLTTTSSSEGTAPSF-------SSYTIELLDTVALNLHRIDKDVQRCDRNYYYFTSSNLEKLRNI 873

  Fly   139 LIAYAHHNRDVGYCQGLNYIAGLLLIVTDDEEKSF----WLLKHIVENI----VPQYHSHNMANL 195
            :.:|...:.::||.||:..:...|:::.|||..::    .|::.:.:|.    ....|..||.:|
Zfish   874 MCSYVWEHLEIGYVQGMCDLLAPLMVILDDECLAYSCFTQLMRRMSQNFPTGGAMDTHFANMRSL 938

  Fly   196 LR--DLAVFRELVIRRIPAVNRHVDNLGLPYPVIASKWFICIFAEVLPVETVLRIWDCVFAEGYK 258
            ::  |..:| ||:         | .|....:.....:||:..|...|..|.|..:|:.::     
Zfish   939 IQILDSELF-ELM---------H-QNGDYTHFYFCYRWFLLDFKRELLYEDVFAVWEVIW----- 987

  Fly   259 IVFRAALTMFVTHKNAILGCDDIA-ALANLFRDTMIQDNI-VTDCHGFVEAMFS-------LRLK 314
                  :...::.|:.:|   .|| ||..::||.::.:|: .||...|...|..       ||:.
Zfish   988 ------VAPRISSKHFVL---FIALALVEVYRDIILDNNMDFTDIIKFFNEMAERHDVQHILRMA 1043

  Fly   315 RSELESLRKVAVL 327
            |   |.:.||..|
Zfish  1044 R---ELVHKVQTL 1053

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5916NP_650524.1 TBC 67..276 CDD:214540 40/211 (19%)
sgsm2XP_068069810.1 RUN 19..201 CDD:459241
PH_RUTBC 262..432 CDD:275431
TBC <845..1014 CDD:214540 43/193 (22%)
Blue background indicates that the domain is not in the aligned region.

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