DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5916 and GRTP1

DIOPT Version :9

Sequence 1:NP_001287357.1 Gene:CG5916 / 41960 FlyBaseID:FBgn0038401 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_001273661.1 Gene:GRTP1 / 79774 HGNCID:20310 Length:344 Species:Homo sapiens


Alignment Length:317 Identity:138/317 - (43%)
Similarity:198/317 - (62%) Gaps:9/317 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDATASSKFSDVDEYGFKRGDHFDYNNYSKFMDGYLKTLTRRRMKWEAILQQNTDLTQVDAKLKR 65
            |.....|:...:|.|||:|.:.||...|.||...||.|||||.:||..:||...  ......:||
Human     1 MQPAERSRVPRIDPYGFERPEDFDDAAYEKFFSSYLVTLTRRAIKWSRLLQGGG--VPRSRTVKR 63

  Fly    66 YIRKGIPGPYRPDVWMKISGAAAAQRRSPDLFRNLLRTEPFDKEISDSISIDLPRTFPDNIHF-- 128
            |:|||:|..:|..|||.:|||.|...::|..:..||:.|. :..:.|:|..||.||||||:.|  
Human    64 YVRKGVPLEHRARVWMVLSGAQAQMDQNPGYYHQLLQGER-NPRLEDAIRTDLNRTFPDNVKFRK 127

  Fly   129 --DMKKQR-LYNILIAYAHHNRDVGYCQGLNYIAGLLLIVTDDEEKSFWLLKHIVENIVPQYHSH 190
              |...|| |||:|:||.|||:.||||||:|:|||.|:::|::||:|||||..:|..|:|.|:|.
Human   128 TTDPCLQRTLYNVLLAYGHHNQGVGYCQGMNFIAGYLILITNNEEESFWLLDALVGRILPDYYSP 192

  Fly   191 NMANLLRDLAVFRELVIRRIPAVNRHVDNLGLPYPVIASKWFICIFAEVLPVETVLRIWDCVFAE 255
            .|..|..|..|..|||..::|||...::.||:.:.::.|:||||:|.::||||||||||||:|.|
Human   193 AMLGLKTDQEVLGELVRAKLPAVGALMERLGVLWTLLVSRWFICLFVDILPVETVLRIWDCLFNE 257

  Fly   256 GYKIVFRAALTMFVTHKNAILGCDDIAALANLFRDTMIQDNIVTDCHGFVEAMFSLR 312
            |.||:||.|||:...|:..||....:..:.:.|:. :.:.:.|.:||.|::...:.|
Human   258 GSKIIFRVALTLIKQHQELILEATSVPDICDKFKQ-ITKGSFVMECHTFMQVCGAAR 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5916NP_001287357.1 TBC 67..276 CDD:214540 104/213 (49%)
GRTP1NP_001273661.1 TBC 65..278 CDD:214540 104/213 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 205 1.000 Domainoid score I2941
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H84592
Inparanoid 1 1.050 270 1.000 Inparanoid score I3010
Isobase 1 0.950 - 0 Normalized mean entropy S2150
OMA 1 1.010 - - QHG53652
OrthoDB 1 1.010 - - D1162786at2759
OrthoFinder 1 1.000 - - FOG0003486
OrthoInspector 1 1.000 - - oto89929
orthoMCL 1 0.900 - - OOG6_100958
Panther 1 1.100 - - LDO PTHR22957
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R540
SonicParanoid 1 1.000 - - X2377
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.820

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