DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5916 and tbc1d12

DIOPT Version :10

Sequence 1:NP_650524.1 Gene:CG5916 / 41960 FlyBaseID:FBgn0038401 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_001072568.1 Gene:tbc1d12 / 780023 XenbaseID:XB-GENE-989549 Length:684 Species:Xenopus tropicalis


Alignment Length:286 Identity:66/286 - (23%)
Similarity:124/286 - (43%) Gaps:47/286 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KTLTRRRMK-----------WEAILQQNTDLTQVDAKLKRYIRKGIPGPYRPDVWMKISGAAAAQ 90
            |.|.:.|::           |...:..|.|:.:...:::....:|:|...|..||....|...  
 Frog   348 KKLMKERIRQEENIASAMVIWNTEILPNWDVMRSTRRVRDLWWQGLPPSIRGKVWSLAIGNEL-- 410

  Fly    91 RRSPDLFRNLL-----RTEPF-----------------DKEIS-DSISIDLPRTFPDNIHFDMK- 131
            ..:|:|:...|     |.:.|                 |:|.| :.|.:|:.|||| :::...| 
 Frog   411 NITPELYEIFLSRAKERWKSFSETNSENENEDAGASLADREASLELIKLDISRTFP-SLYIFQKG 474

  Fly   132 ---KQRLYNILIAYAHHNRDVGYCQGLNYIAGLLLIVTDDEEKSFWLLKHIVE---NIVPQYHSH 190
               ...|::||.||..:..||||.||:::||. :||:..:|..:|....:::.   .:......|
 Frog   475 GPYHDLLHSILGAYTCYRPDVGYVQGMSFIAA-VLILNLEEADAFIAFANLLNKPCQLAFFRVDH 538

  Fly   191 NMANLLRDLAVFRELVIRRIPAVNRHVDNLGLPYPVIASKWFICIFAEVLPVETVLRIWDCVFAE 255
            :|  :|:..|.|.......:|.:..|.:...|...:....|...::::.||::...|:||....:
 Frog   539 SM--MLKYFAAFEVFFEENLPKLFFHFNAYSLTPDLYLIDWIFTLYSKSLPLDLACRVWDVFCRD 601

  Fly   256 GYKIVFRAALTMFVTHKNAILGCDDI 281
            |.:.:||.||.:...:::.:|..|.|
 Frog   602 GEEFLFRTALGILRLYEDILLQMDFI 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5916NP_650524.1 TBC 67..276 CDD:214540 57/238 (24%)
tbc1d12NP_001072568.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..41
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 119..138
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 169..202
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 219..290
TBC 389..622 CDD:214540 57/238 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.