DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5916 and Tbc1d12

DIOPT Version :10

Sequence 1:NP_650524.1 Gene:CG5916 / 41960 FlyBaseID:FBgn0038401 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_001364043.1 Gene:Tbc1d12 / 685933 RGDID:9377071 Length:693 Species:Rattus norvegicus


Alignment Length:313 Identity:69/313 - (22%)
Similarity:131/313 - (41%) Gaps:54/313 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KTLTRRRMK-----------WEAILQQNTDLTQVDAKLKRYIRKGIPGPYRPDVWMKISGAAAAQ 90
            |.:.:.|.|           |...:..|.::.:...:::....:|:|...|..||....|...  
  Rat   358 KRIMKERFKQEESIASAMVIWINEILPNWEVMRSTRRVRELWWQGLPPSVRGKVWSLAVGNEL-- 420

  Fly    91 RRSPDLFRNLL-----RTEPFDKEISDS----------------ISIDLPRTFPDNIHFDMK--- 131
            ..:|:|:...|     |.:.|.:..|||                |.:|:.|||| :::...|   
  Rat   421 NITPELYEIFLSRAKERWKSFSESSSDSDMEGLSVADREASLELIKLDISRTFP-SLYIFQKGGP 484

  Fly   132 -KQRLYNILIAYAHHNRDVGYCQGLNYIAGLLLIVTDDEEKSFWLLKHIVE---NIVPQYHSHNM 192
             ...|::||.||..:..||||.||:::||. :||:..:|..:|....:::.   .:......|:|
  Rat   485 YHDVLHSILGAYTCYRPDVGYVQGMSFIAA-VLILNLEEADAFIAFANLLNRPCQLAFFRVDHSM 548

  Fly   193 ANLLRDLAVFRELVIRRIPAVNRHVDNLGLPYPVIASKWFICIFAEVLPVETVLRIWDCVFAEGY 257
              :|:..|.|.......:..:..|..:..|...:....|...::::.||::...|:||....:|.
  Rat   549 --MLKYFATFEVFFEENLSKLFLHFKSYNLTPDIYLIDWIFTLYSKSLPLDLACRVWDVFCRDGE 611

  Fly   258 KIVFRAALTMFVTHKNAILGCDDIAALANLFRDTMIQDNIVTDCHGFVEAMFS 310
            :.:||..|.:...:::.:|..|.|.....|   |.:.::|.:      |.:||
  Rat   612 EFLFRTGLGILRLYEDILLQMDFIHIAQFL---TKLPEDITS------EKLFS 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5916NP_650524.1 TBC 67..276 CDD:214540 55/236 (23%)
Tbc1d12NP_001364043.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..57
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..120
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 156..229
TBC 399..630 CDD:214540 55/236 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.