DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5916 and tbc1d8b

DIOPT Version :10

Sequence 1:NP_650524.1 Gene:CG5916 / 41960 FlyBaseID:FBgn0038401 Length:330 Species:Drosophila melanogaster
Sequence 2:XP_009299628.1 Gene:tbc1d8b / 566657 ZFINID:ZDB-GENE-030131-3135 Length:1152 Species:Danio rerio


Alignment Length:289 Identity:80/289 - (27%)
Similarity:138/289 - (47%) Gaps:29/289 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 KLKRYIRKGIPGPYRPDVWMKISGAAAAQRRSPDLFRNLLRTEPFDKEIS-DSISIDLPRTFPDN 125
            |.:..|.:|:|...|.::||..|||.......|..:..||........:: |.|..||.|:.|::
Zfish   461 KTRDLIVRGVPETLRGELWMLFSGAVHDMISHPGYYGRLLEDCMGSSSLACDEIERDLHRSLPEH 525

  Fly   126 IHF--DMKKQRLYNILIAYAHHNRDVGYCQGLNYIAGLLLIVTDDEEKSFWLLKHIVENIVPQYH 188
            ..|  |.....|..:|.||||.|..:||||.:|.:..:||:...:|| :||||..:.|.::|.|.
Zfish   526 PAFQSDTGISALRRVLTAYAHRNPKIGYCQAMNILTSVLLLYAKEEE-AFWLLVAVCERMLPDYF 589

  Fly   189 SHNMANLLRDLAVFRELVIRRIPAVNRHVDNLGLPYPVIASKWFICIFAEVLPVETVLRIWDCVF 253
            :..:...|.|.|||.||:...:..:..|:.:|.. :..::..||:.:|..|||:|:.:.:.||.|
Zfish   590 NRRIIGALVDQAVFEELIREHLTQLTEHMTDLSF-FSSVSLSWFLTLFISVLPIESAVNVVDCFF 653

  Fly   254 AEGYKIVFRAALTMFVTHKNAILGCDDIA---ALANLFRDTM----------IQDNIVT------ 299
            .:|.|.:.:..|.:...:.:.:|.|:|.|   .:.|.|.|::          :|....|      
Zfish   654 YDGIKAILQLGLAVLDYNMDNLLCCNDDAEAVTVLNRFFDSVTNKDSPLPATVQQASATANDKSI 718

  Fly   300 ---DCHGFVEAMFSL--RLKRSELESLRK 323
               |....::..:..  .::..|:|::||
Zfish   719 QKVDISDLIKEAYEKYGDIRTEEVENMRK 747

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5916NP_650524.1 TBC 67..276 CDD:214540 65/211 (31%)
tbc1d8bXP_009299628.1 PH-like 154..252 CDD:473070
PH-GRAM2_TBC1D8B 294..386 CDD:270159
TBC 468..676 CDD:214540 64/209 (31%)
PRK12495 <1028..1144 CDD:183558
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.