DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5916 and RN-tre

DIOPT Version :10

Sequence 1:NP_650524.1 Gene:CG5916 / 41960 FlyBaseID:FBgn0038401 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_652381.1 Gene:RN-tre / 36554 FlyBaseID:FBgn0020620 Length:571 Species:Drosophila melanogaster


Alignment Length:335 Identity:81/335 - (24%)
Similarity:146/335 - (43%) Gaps:37/335 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 DEYGFKRGDHFD--------YNNYSKFMDGYLKTLTRRRMKWEAILQQNTDLTQVDAKLKRYIRK 69
            |:|||.......        :.|         |....|..||..:|.|   ......||.:.:.|
  Fly    50 DKYGFLHDSRLPSTRDAQEVHRN---------KIEMERDKKWMKMLNQ---WPPPQDKLHKRVYK 102

  Fly    70 GIPGPYRPDVWMKISGAAAAQRRSPDLFRNLLRTEPFDKEISDSISIDLPRTFPDNIHF----DM 130
            |||...|...|.|:.....:...:..::..:|:........:..|..|:.|.|.||:.|    .:
  Fly   103 GIPDRVRMVAWNKLLDIQQSINNNAGVYLRMLQLARKYSTETRQIDADVNRQFRDNLAFRERYSV 167

  Fly   131 KKQRLYNILIAYAHHNRDVGYCQGLNYIAGLLLIVTDDEEKSFWLLKHIVENIVPQYHSHNM--- 192
            |:..|:|:|.||:.:|.::|||||:..:||:||:...:|| :||.|..::.:  .:|..|.:   
  Fly   168 KQCSLFNVLNAYSIYNSELGYCQGMACVAGVLLLYLHEEE-AFWALNTLITD--QKYGMHGLFIE 229

  Fly   193 --ANLLRDLAVFRELVIRRIPAVNRHVDNLGLPYPVIASKWFICIFAEVLPVETVLRIWDCVFAE 255
              ..|.|.:.....::.:.:..:::|.....:...:.|.|||..:|.|.:|....||:||....:
  Fly   230 GFPKLTRFIDHHDRIMSKIMRKLHKHFTKHNVDALLYAIKWFFVVFVERVPFSLSLRVWDIFMLD 294

  Fly   256 GYKIVFRAALTMFVTHKNAILGCDDIAALANLFRDTMIQDNIVTDCHGFVEAMFSLRLKRSELES 320
            |.:::...|:|:...||:.:|...|:.|:.. :....:..|........::|:..:..|..:|  
  Fly   295 GDRVILSMAITILYLHKDELLRLKDMDAIIE-YLQVRLHKNFGYSDDDAIQALERVMKKLKDL-- 356

  Fly   321 LRKVAVLNPA 330
              |:.|..||
  Fly   357 --KLDVPPPA 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5916NP_650524.1 TBC 67..276 CDD:214540 57/217 (26%)
RN-treNP_652381.1 TBC 100..315 CDD:214540 57/217 (26%)

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