DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5916 and Rabgap1l

DIOPT Version :10

Sequence 1:NP_650524.1 Gene:CG5916 / 41960 FlyBaseID:FBgn0038401 Length:330 Species:Drosophila melanogaster
Sequence 2:XP_063128419.1 Gene:Rabgap1l / 304914 RGDID:1304620 Length:1066 Species:Rattus norvegicus


Alignment Length:254 Identity:72/254 - (28%)
Similarity:125/254 - (49%) Gaps:20/254 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 WEAIL-QQNTDLTQVDAKLKRYIRKGIPGPYRPDVWMKISGAAAAQRRSPDLFRNLLRTEPFDKE 109
            |..:| :.:.:|......|...::.|:|...|.:||..::|....|... |.:|.|:..:...:.
  Rat   528 WGELLGRWHNNLNARPKGLPTLVKSGVPEALRAEVWQLLAGCHDNQAML-DKYRILITKDSAQES 591

  Fly   110 ISDSISIDLPRTFPDNIHFDMK----KQRLYNILIAYAHHNRDVGYCQGLNYIAGLLLIVTDDEE 170
            :   |:.|:.||||.:.:|...    ::.||.|..||:.::.|:|||||.:::|.:||:.. .||
  Rat   592 V---ITRDIHRTFPAHDYFKDTGGDGQESLYKICKAYSVYDEDIGYCQGQSFLAAVLLLHM-PEE 652

  Fly   171 KSFWLLKHIVENIVPQY-----HSHNMANLLRDLAVFRELVIRRIPAVNRHVDNLGLPYPVIASK 230
            ::|.:|    .||:.:|     :.:|..:|........:|:..::|.:..|..:|.|...:.||:
  Rat   653 QAFCVL----VNIMYKYKLRDLYKNNFEDLHCKFYQLEKLMQEQLPDLYSHFCDLNLEAHMYASQ 713

  Fly   231 WFICIFAEVLPVETVLRIWDCVFAEGYKIVFRAALTMFVTHKNAILGCDDIAALANLFR 289
            ||:.:|....|:..|..|.|.:..||..|:|..||.:..|.|..:|..|...|| ..||
  Rat   714 WFLTLFTAKFPLCMVFHIIDLLLCEGLNIIFHVALALLKTSKEDLLQADFEGAL-KFFR 771

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5916NP_650524.1 TBC 67..276 CDD:214540 62/217 (29%)
Rabgap1lXP_063128419.1 None

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