DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5916 and Tbc1d30

DIOPT Version :10

Sequence 1:NP_650524.1 Gene:CG5916 / 41960 FlyBaseID:FBgn0038401 Length:330 Species:Drosophila melanogaster
Sequence 2:XP_038936067.1 Gene:Tbc1d30 / 299824 RGDID:1305255 Length:946 Species:Rattus norvegicus


Alignment Length:408 Identity:100/408 - (24%)
Similarity:176/408 - (43%) Gaps:106/408 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDATASSKFSDVDEYGFKRGD------------------HFDYNNYSKFMDGYLKTLTR------ 41
            :|::..:..|||...|...||                  :.:..:.|:     |||:.|      
  Rat   142 LDSSTETSGSDVFLGGRGAGDSRVLQELRERPSLRLQMQYLERKDSSE-----LKTILRELKSRV 201

  Fly    42 --------RRMKWEAIL----QQNTDLT-----------QVDAKLK------------------- 64
                    |::|.:..|    |:|.|:.           :||.|||                   
  Rat   202 GIQSAKLLRQLKQKDRLLHKVQKNCDIVTACLQAVSQKRRVDTKLKFTLEPSLGQNGFQQWYDAL 266

  Fly    65 ---RYIRKGIPGPYRPDVWMKISG----AAAAQRRSPDLFRNLLRTEPFDKEISDSISIDLPRTF 122
               ..:..|||..:|..||:.::.    :.|........|....|:.|.|..:...|..||.||.
  Rat   267 KAVARLSTGIPKEWRRKVWLTLADHYLHSIAIDWDKTMRFTFNERSNPDDDSMGIQIVKDLHRTG 331

  Fly   123 PDNI---HFDMKKQRLYNILIAYAHHNRDVGYCQGLNYIAGLLL-IVTDDEEKSFWLLKHIVENI 183
            ..:.   ..:..:..|..:|:|||..|::||||||.|.:|.|:| ::..:|..:..::.::::.:
  Rat   332 CSSYCGQEAEQDRVVLKRVLLAYARWNKNVGYCQGFNILAALILEVMEGNEGDALKIMIYLIDKV 396

  Fly   184 VPQ-YHSHNMANLLRDLAVFRELVIRRIPAVNRHVDNL----------GLPYP---VIASKWFIC 234
            :|: |..:|:..|..|:||||:|:..::|.:::|:|.|          |...|   |...:||:.
  Rat   397 LPESYFVNNLRALSVDMAVFRDLLRLKLPELSQHLDTLQRTSNKESGGGYEPPLTNVFTMQWFLT 461

  Fly   235 IFAEVLPVETVLRIWDCVFAEGYKIVFRAALTMFVTHKNAILGCDDIAALANLFRDTM------I 293
            :||..||..|||:|||.||.||.:|:.|.:|.::......|..|:    .|:.|..||      :
  Rat   462 LFATCLPNHTVLKIWDSVFFEGSEIILRVSLAIWAKLGEQIECCE----TADEFYGTMGRLTQEM 522

  Fly   294 QDNIVTDCHGFVEAMFSL 311
            .::.:...|..::.::|:
  Rat   523 LEHDLLQSHELMQTVYSM 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5916NP_650524.1 TBC 67..276 CDD:214540 69/230 (30%)
Tbc1d30XP_038936067.1 TBC 273..494 CDD:214540 69/220 (31%)
DUF4682 663..791 CDD:464830
Blue background indicates that the domain is not in the aligned region.

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