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Protein Alignment CG5903 and APOO
DIOPT Version :9
Sequence 1: | NP_001287356.1 |
Gene: | CG5903 / 41959 |
FlyBaseID: | FBgn0038400 |
Length: | 226 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_011543886.1 |
Gene: | APOO / 79135 |
HGNCID: | 28727 |
Length: | 202 |
Species: | Homo sapiens |
Alignment Length: | 137 |
Identity: | 42/137 - (30%) |
Similarity: | 57/137 - (41%) |
Gaps: | 31/137 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 52 PKPERHPPQDSV------LHKNLEAGVRYVREEVQSGYKAVADQAGIVGHYVE-----------T 99
||.: .||::|| |:...|...:|| ||.:|..:....| :.||.| .
Human 29 PKKD-SPPKNSVKVDELSLYSVPEGQSKYV-EEARSQLEESISQ---LRHYCEPYTTWCQETYSQ 88
Fly 100 AKAHTQSTID--------MLNEPQNSLHRSGAIVVGGLAGFIFAARGGFIKKVLYSGIGAGAVAS 156
.|...||.:. :.|.|.....|.|.|...||.|.:. |||..|||::|.....|..||
Human 89 TKPKMQSLVQWGLDSYDYLQNAPPGFFPRLGVIGFAGLIGLLL-ARGSKIKKLVYPPGFMGLAAS 152
Fly 157 MCYPRQA 163
:.||:||
Human 153 LYYPQQA 159
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG5903 | NP_001287356.1 |
ApoO |
42..180 |
CDD:286810 |
42/137 (31%) |
APOO | XP_011543886.1 |
ApoO |
45..181 |
CDD:286810 |
36/120 (30%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C165143236 |
Domainoid |
1 |
1.000 |
44 |
1.000 |
Domainoid score |
I12312 |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4798 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
50 |
1.000 |
Inparanoid score |
I5474 |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1605767at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0002885 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR14564 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
User_Submission |
0 | 0.000 |
Not matched by this tool. |
|
9 | 8.860 |
|
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