DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mic26-27 and apooa

DIOPT Version :10

Sequence 1:NP_650523.1 Gene:Mic26-27 / 41959 FlyBaseID:FBgn0038400 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_001410671.1 Gene:apooa / 641319 ZFINID:ZDB-GENE-031118-91 Length:216 Species:Danio rerio


Alignment Length:166 Identity:46/166 - (27%)
Similarity:76/166 - (45%) Gaps:18/166 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TATMGIMAAVAVKAAPEPQKPAS--SAADCSLVCRPSELPIYGSLRKTEP-KPERHPPQDSVLHK 66
            :.|:|:.:| :|.||....||.:  |..:.||...|.:        ..:| :.||...::.|...
Zfish    11 SGTLGLFSA-SVLAASADDKPKTTLSVEELSLYSVPQQ--------NIQPVESERGQLEERVAEL 66

  Fly    67 NL--EAGVRYVREEVQSGYKAVADQAGIVGHYVETAKAHTQSTIDML-NEPQNSLHRSGAIVVGG 128
            .|  |..:.:.::..:|....|....|.|...|::.....|::...| |.|.....|:|.|...|
Zfish    67 RLMTEPYLTWCQQTTRSAKLTVQGAYGTVKPKVDSTVQFGQNSYAYLKNPPPEFYPRAGIIGFAG 131

  Fly   129 LAGFIFAARGGFIKKVLYSGIGAGAV-ASMCYPRQA 163
            :.| :|..||..:|:::|. .|..|| |||.||::|
Zfish   132 ILG-LFLGRGSRLKRLIYP-TGLMAVGASMYYPQEA 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mic26-27NP_650523.1 ApoO 42..181 CDD:462891 34/127 (27%)
apooaNP_001410671.1 ApoO 40..188 CDD:462891 37/136 (27%)

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