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Protein Alignment CG5903 and apoo
DIOPT Version :9
Sequence 1: | NP_001287356.1 |
Gene: | CG5903 / 41959 |
FlyBaseID: | FBgn0038400 |
Length: | 226 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_012811770.1 |
Gene: | apoo / 100125130 |
XenbaseID: | XB-GENE-1002771 |
Length: | 229 |
Species: | Xenopus tropicalis |
Alignment Length: | 186 |
Identity: | 53/186 - (28%) |
Similarity: | 85/186 - (45%) |
Gaps: | 47/186 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 ATMGIMAAVAVKAAPE----PQKPASSAADCSLVCRPSELPIYGSLRKTEPKPERHPPQDSVLHK 66
|::|.: ::.:.||.| |:| :.:..||.:|.: |..|....:|. ..
Frog 16 ASLGFV-SLHIHAATEDSTSPRK----------IIKVEELSLYST-----PVQEAKYVEDK--QT 62
Fly 67 NLEAGVRYVREEVQSGYKAVADQAGIVGHYV------ETAKAHTQSTIDMLNE-PQNSLHRSGAI 124
.||.||.:||:.| :.|.:....| |: |||..|::.|.:.|.: |.....|.|.|
Frog 63 QLEEGVSWVRQAV-APYTSWCQDA-----YIKAKPKFETAVEHSKGTYEFLKDAPPGFYPRLGLI 121
Fly 125 VVGGLAGFIFAARGGFIKKVLY----SGIGAGAVASMCYPRQA---EENCRVVLYE 173
...|:.| :|.|||..:|||:| .|:| ||:.||:|| .::...|:|:
Frog 122 GFAGIVG-LFLARGSRVKKVIYPLGFMGLG----ASLYYPQQAVTIAKDTSAVMYD 172
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG5903 | NP_001287356.1 |
ApoO |
42..180 |
CDD:286810 |
44/146 (30%) |
apoo | XP_012811770.1 |
ApoO |
45..181 |
CDD:286810 |
44/146 (30%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
47 |
1.000 |
Domainoid score |
I11838 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1605767at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0002885 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR14564 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 4.110 |
|
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