DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sb and TMPRSS11D

DIOPT Version :9

Sequence 1:NP_001287355.1 Gene:Sb / 41958 FlyBaseID:FBgn0003319 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_004253.1 Gene:TMPRSS11D / 9407 HGNCID:24059 Length:418 Species:Homo sapiens


Alignment Length:295 Identity:109/295 - (36%)
Similarity:149/295 - (50%) Gaps:33/295 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   497 VLATSG-IETNEISD-SSIPDAGALGHVKTISAARSECGV-PTL-ARPETRIVGGKSAAFGRWPW 557
            :|..|| :|.|..:: :|:.|..|...:      .:|||. |.| ...|.||:||..|..|.|||
Human   142 MLNNSGNLEINPSTEITSLTDQAAANWL------INECGAGPDLITLSEQRILGGTEAEEGSWPW 200

  Fly   558 QVSVRRTSFFGFSSTHRCGGALINENWIATAGHCVDDLLISQIRIRVGEYDF---SHVQEQLPYI 619
            |||:|      .::.|.|||:|||..||.||.||        .|......|:   |.:....|.:
Human   201 QVSLR------LNNAHHCGGSLINNMWILTAAHC--------FRSNSNPRDWIATSGISTTFPKL 251

  Fly   620 ERGVAKKVVHPKYSFLTYEYDLALVKLEQPLEFAPHVSPICLP-ETDSLLIGMNATVTGWGRLSE 683
            ...|...::|..|...|:|.|:|||:||..:.|...:..:||| .|.::..|..|.|||||....
Human   252 RMRVRNILIHNNYKSATHENDIALVRLENSVTFTKDIHSVCLPAATQNIPPGSTAYVTGWGAQEY 316

  Fly   684 GG-TLPSVLQEVSVPIVSNDNCKSMFMRAGRQEFIPDIFLCAGYETGGQDSCQGDSGGPLQAKSQ 747
            .| |:|. |::..|.|:|||.|.:.....|.   |....||||...||.|:|||||||||..:..
Human   317 AGHTVPE-LRQGQVRIISNDVCNAPHSYNGA---ILSGMLCAGVPQGGVDACQGDSGGPLVQEDS 377

  Fly   748 DGRFFLAGIISWGIGCAEANLPGVCTRISKFTPWI 782
            ...:|:.||:|||..|...:.|||.||::.:..||
Human   378 RRLWFIVGIVSWGDQCGLPDKPGVYTRVTAYLDWI 412

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
SbNP_001287355.1 Tryp_SPc 543..782 CDD:214473 93/243 (38%)
Tryp_SPc 544..785 CDD:238113 94/244 (39%)