DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sb and Tmprss11d

DIOPT Version :9

Sequence 1:NP_001287355.1 Gene:Sb / 41958 FlyBaseID:FBgn0003319 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_001028824.2 Gene:Tmprss11d / 64565 RGDID:620654 Length:417 Species:Rattus norvegicus


Alignment Length:384 Identity:120/384 - (31%)
Similarity:182/384 - (47%) Gaps:58/384 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   423 TRRTTTPTTTTRRTTTNKPTRPYQRPTTATSSSSTSTTSSKTPTTTRPISSSSSSSSGIVT---- 483
            |....:|.|...||.:.   |.....|.|...|:..:...:|     .:.......||:|.    
  Rat    62 TEALNSPATHEYRTLSE---RIESMITDAFRESNLRSEFIRT-----HVVKLRKEGSGVVADVVM 118

  Fly   484 ---SSQRPTQPTHRTPV------LATSG----IETNEISDSSIPDAGALGHVKTISAARSECGVP 535
               ||:|..:...:|.:      |::||    ..:|||:..:..|        |.:....|||  
  Rat   119 KFRSSKRNNKKAMKTRIQSVLQRLSSSGNLEIAPSNEITSLTDQD--------TENVLTQECG-- 173

  Fly   536 TLARP------ETRIVGGKSAAFGRWPWQVSVRRTSFFGFSSTHRCGGALINENWIATAGHCVDD 594
              |||      |.||:||..|..|.||||||::      .::.|.|||.||:..|:.||.||...
  Rat   174 --ARPDLITLSEERIIGGTQAETGDWPWQVSLQ------LNNVHHCGGTLISNLWVLTAAHCFRS 230

  Fly   595 LLISQIRIRVGEYDFSHVQEQLPYIERGVAKKVVHPKYSFLTYEYDLALVKLEQPLEFAPHVSPI 659
              .|..:.....:..|.:..:|....|.:   :.|.:|:.:|.:.|:|:|:|::|:.|..::..:
  Rat   231 --YSNPQQWTATFGVSTISPRLRVRVRAI---LAHAEYNSITRDNDIAVVQLDRPVTFTRNIHRV 290

  Fly   660 CLP-ETDSLLIGMNATVTGWGRLSEGGTLPSVLQEVSVPIVSNDNCKSMFMRAGRQEFIPDIFLC 723
            ||| .|.:::....|.|||||.|:.||...:.||:..|.|||::.|.......|  ..:|.: ||
  Rat   291 CLPAATQNIIPDSVAYVTGWGSLTYGGNTVTNLQQGEVRIVSSEVCNEPAGYGG--SVLPGM-LC 352

  Fly   724 AGYETGGQDSCQGDSGGPLQAKSQDGRFFLAGIISWGIGCAEANLPGVCTRISKFTPWI 782
            ||..:|..|:|||||||||..:.....:|:.||:|||..|...|.|||.||::.:..||
  Rat   353 AGVRSGAVDACQGDSGGPLVQEDTRRLWFVVGIVSWGYQCGLPNKPGVYTRVTAYRNWI 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbNP_001287355.1 Tryp_SPc 543..782 CDD:214473 86/239 (36%)
Tryp_SPc 544..785 CDD:238113 87/240 (36%)
Tmprss11dNP_001028824.2 SEA 48..150 CDD:396113 20/95 (21%)
Tryp_SPc 186..414 CDD:238113 87/240 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337567
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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