DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sb and tmprss5

DIOPT Version :10

Sequence 1:NP_476709.1 Gene:Sb / 41958 FlyBaseID:FBgn0003319 Length:787 Species:Drosophila melanogaster
Sequence 2:XP_009289870.2 Gene:tmprss5 / 569688 ZFINID:ZDB-GENE-131121-184 Length:551 Species:Danio rerio


Alignment Length:274 Identity:106/274 - (38%)
Similarity:153/274 - (55%) Gaps:21/274 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   517 GALGHVKTISAARSECGVPTLAR-PETRIVGGKSAAFGRWPWQVSVRRTSFFGFSSTHRCGGALI 580
            |:....|.|:....|||  |.|: |  ||:||..||.||||||||:.      :::.|.|||::|
Zfish   288 GSCSTGKVIALKCFECG--TRAKLP--RIIGGVEAALGRWPWQVSLY------YNNRHICGGSII 342

  Fly   581 NENWIATAGHCVDDLLISQIR---IRVGEYDFSHVQEQLPYIERGVAKKVVHPKYSFLTYEYDLA 642
            ...||.||.|||.:..:.|:.   :..|... |::.:...|....|.:.:.:..|:..|::.|:|
Zfish   343 TNQWIVTAAHCVHNYRLPQVPSWVVYAGIIT-SNLAKLAQYQGFAVERIIYNKNYNHRTHDNDIA 406

  Fly   643 LVKLEQPLEFAPHVSPICLPETD-SLLIGMNATVTGWGRLSEGGT-LPSVLQEVSVPIVSNDNCK 705
            ||||:.||.|:..:.|:|||:.| .|..|....::|||....... :|.||:|..||::|...|.
Zfish   407 LVKLKTPLNFSDTIRPVCLPQYDHDLPGGTQCWISGWGYTQPDDVHIPEVLKEAPVPLISTKKCN 471

  Fly   706 SMFMRAGRQEFIPDIFLCAGYETGGQDSCQGDSGGPLQAKSQDGRFFLAGIISWGIGCAEANLPG 770
            |..|..|.   |....|||||..|..|:|||||||||..:.:: .:.|.|::|||.||||.|.||
Zfish   472 SSCMYNGE---ITSRMLCAGYSEGKVDACQGDSGGPLVCQDEN-VWRLVGVVSWGTGCAEPNHPG 532

  Fly   771 VCTRISKFTPWILE 784
            |.|::::|..||.:
Zfish   533 VYTKVAEFLGWIYD 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbNP_476709.1 Tryp_SPc 544..785 CDD:238113 96/246 (39%)
tmprss5XP_009289870.2 None

Return to query results.
Submit another query.