DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sb and hpn

DIOPT Version :9

Sequence 1:NP_001287355.1 Gene:Sb / 41958 FlyBaseID:FBgn0003319 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_001091657.2 Gene:hpn / 569259 ZFINID:ZDB-GENE-141212-373 Length:425 Species:Danio rerio


Alignment Length:279 Identity:108/279 - (38%)
Similarity:150/279 - (53%) Gaps:45/279 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   531 ECGVPTLARPETRIVGGKSAAFGRWPWQVSVRRTSFFGFSSTHRCGGALINENWIATAGHCVDDL 595
            :||...|  ||.|||||..|..|.||||||::      :...|:|||::|::.||.:|.||..:.
Zfish   153 DCGRRML--PEERIVGGVDARQGSWPWQVSLQ------YDGVHQCGGSIISDRWIISAAHCFPER 209

  Fly   596 L--ISQIRIRVGEYDFSHVQEQLPYIERGVAKKVVHPKYSFLTY--------EYDLALVKLEQPL 650
            .  .|:.|:.:|....:.:::.:...|   .|.||:.. |:|.:        ..|:|::.|.:||
Zfish   210 YRHASRWRVLMGSIYNTPIRKNVVIAE---VKTVVYHS-SYLPFVDANIDDNSRDIAVISLTKPL 270

  Fly   651 EFAPHVSPICLPETDSLLI-GMNATVTGWGRLSEGGTLPSVLQEVSVPIVSNDNCKSMFMRAGRQ 714
            :|..::.|:|||.....|. |...||||||.:...||..:||||..|||:|:..|..        
Zfish   271 QFTDYIQPVCLPTYGQRLADGQMGTVTGWGNVEYYGTQANVLQEAHVPIISDAVCNG-------- 327

  Fly   715 EFIPDIF--------LCAGYETGGQDSCQGDSGGPLQAK---SQDGRFFLAGIISWGIGCAEANL 768
               ||.:        .|||||.||.||||||||||..|.   |:..|:.|.|::|||.|||.|..
Zfish   328 ---PDYYDNQVTTTMFCAGYEKGGTDSCQGDSGGPFVAADVLSKTSRYRLLGVVSWGTGCAMAKK 389

  Fly   769 PGVCTRISKFTPWILEHVR 787
            |||.||:|:|.|||...:|
Zfish   390 PGVYTRVSRFLPWISTAMR 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbNP_001287355.1 Tryp_SPc 543..782 CDD:214473 100/260 (38%)
Tryp_SPc 544..785 CDD:238113 101/262 (39%)
hpnNP_001091657.2 SRCR_2 54..160 CDD:321960 3/8 (38%)
Tryp_SPc 164..404 CDD:238113 100/260 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576750
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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