DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sb and CG11843

DIOPT Version :10

Sequence 1:NP_476709.1 Gene:Sb / 41958 FlyBaseID:FBgn0003319 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_651663.1 Gene:CG11843 / 43432 FlyBaseID:FBgn0039630 Length:316 Species:Drosophila melanogaster


Alignment Length:309 Identity:97/309 - (31%)
Similarity:135/309 - (43%) Gaps:61/309 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   514 PDAGALG----HVKTISAARSECG--VPTLARPETR-----------IVGG---------KSAAF 552
            ||...:|    :.|::...|.|.|  :|. |..|:|           ||||         ..|..
  Fly    22 PDMDVVGSCSRYKKSVFEERIEFGFLLPG-ASIESRIIDNCRSYTPLIVGGHPAQPREFPHMARL 85

  Fly   553 GRWPWQVSVRRTSFFGFSSTHRCGGALINENWIATAGHCVDDLLISQIRIRVGEYDFSHVQEQLP 617
            ||.|...|  |..:|       |||.||:|.::.||.||::........:|:||.||..:.|...
  Fly    86 GRRPDPSS--RADWF-------CGGVLISERFVLTAAHCLESERGEVNVVRLGELDFDSLDEDAA 141

  Fly   618 YIERGVAKKVVHPKYSFLTYEYDLALVKLEQPLEFAPHVSPICLP-----ETDSLLIGMNATVTG 677
            ..:..||..:.||.|....:.:|:.||||.:.:.|..:..|.|||     .:||.:      ..|
  Fly   142 PRDYMVAGYIAHPGYEDPQFYHDIGLVKLTEAVVFDLYKHPACLPFQDERSSDSFI------AVG 200

  Fly   678 WGRLSEGGTL-PSV-LQEVSVPIVSNDNCKSMFMRAGRQEFIPDIF-----LCAGYETGGQDSCQ 735
            ||  |.|..| ||. |.:|.:....|..||.:..|  :.|..|..|     ||.|.|. .||:|.
  Fly   201 WG--STGLALKPSAQLLKVKLQRYGNWVCKKLLTR--QVEEFPRGFDGNNQLCVGSEM-AQDTCN 260

  Fly   736 GDSGGPL--QAKSQDGRFFLAGIISWGIGCAEANLPGVCTRISKFTPWI 782
            |||||||  ..:.....:.:.||.|.|:.|....:||:.||:..:..||
  Fly   261 GDSGGPLLMYHREYPCMYVVVGITSAGLSCGSPGIPGIYTRVYPYLGWI 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbNP_476709.1 Tryp_SPc 544..785 CDD:238113 86/262 (33%)
CG11843NP_651663.1 Tryp_SPc 68..312 CDD:238113 86/262 (33%)

Return to query results.
Submit another query.