DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sb and CG4613

DIOPT Version :9

Sequence 1:NP_001287355.1 Gene:Sb / 41958 FlyBaseID:FBgn0003319 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_001261841.1 Gene:CG4613 / 39586 FlyBaseID:FBgn0036427 Length:374 Species:Drosophila melanogaster


Alignment Length:382 Identity:121/382 - (31%)
Similarity:179/382 - (46%) Gaps:89/382 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   443 RPYQRPTTATSSSSTSTT-----------------------------SSKTPTTTRPISSSSSSS 478
            :|.:.|....:.|:||:|                             :|:||:.|     :||..
  Fly    38 KPERLPPLPVNGSTTSSTGPPPGVQSDFIDDLIEGHKQQILSNVLGVASETPSDT-----ASSLG 97

  Fly   479 SGIVTSSQRPTQPTHRTPVLATSGIETNEISDSSIPDAGALGHVKTISAARSECGVPTLARPETR 543
            |..::||..|..|.                      :.|.....:....|...||||.:    .|
  Fly    98 STSLSSSASPVFPL----------------------EGGGAKAFRVNRCASCTCGVPNV----NR 136

  Fly   544 IVGGKSAAFGRWPWQVSVRRTSFFGFSSTHRCGGALINENWIATAGHCVDDLLISQIRIRVGEYD 608
            ||||......::||...:.|.:|.      .|||.|||:.::.||.|||..:.:..:.:|:.:.|
  Fly   137 IVGGTQVRTNKYPWIAQIIRGTFL------FCGGTLINDRYVLTAAHCVHGMDMRGVSVRLLQLD 195

  Fly   609 FS--HVQEQLPYIERGVAKKVVHPKYSFLTYEYDLALVKLEQPLEFAPHVSPICLPET-----DS 666
            .|  |:.     :.|.||....|..|..::..:|:||::|:||:.....:.|.|||..     |.
  Fly   196 RSSTHLG-----VTRSVAFAHAHVGYDPVSLVHDIALLRLDQPIPLVDTMRPACLPSNWLQNFDF 255

  Fly   667 LLIGMNATVTGWGRLSEGGTLPSVLQEVSVPIVSNDNCKSMFMRAGRQEFIPDIFLCAGY-ETGG 730
                ..|.|.|||...|||:..||||||.|||::|..|::...|:    .|.|..:|||| :|||
  Fly   256 ----QKAIVAGWGLSQEGGSTSSVLQEVVVPIITNAQCRATSYRS----MIVDTMMCAGYVKTGG 312

  Fly   731 QDSCQGDSGGPLQAKSQDGRFFLAGIISWGIGCAEANLPGVCTRISKFTPWILEHVR 787
            :|:|||||||||..:  |..|.|||::|:|.|||:.:.|||.||:|::..||..:.|
  Fly   313 RDACQGDSGGPLIVR--DRIFRLAGVVSFGYGCAKPDAPGVYTRVSRYLEWIAVNTR 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbNP_001287355.1 Tryp_SPc 543..782 CDD:214473 95/246 (39%)
Tryp_SPc 544..785 CDD:238113 96/248 (39%)
CG4613NP_001261841.1 Tryp_SPc 136..362 CDD:214473 95/246 (39%)
Tryp_SPc 137..362 CDD:238113 94/245 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 147 1.000 Domainoid score I2768
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.910

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