DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sb and CG1299

DIOPT Version :10

Sequence 1:NP_476709.1 Gene:Sb / 41958 FlyBaseID:FBgn0003319 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_647862.1 Gene:CG1299 / 38496 FlyBaseID:FBgn0035501 Length:511 Species:Drosophila melanogaster


Alignment Length:519 Identity:146/519 - (28%)
Similarity:212/519 - (40%) Gaps:146/519 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   312 TKPRPTGWTKPGIVNLPMPARPSKPSKPTKKPIVYDRTPPPPPSVPPSTSTSTTSTSLIWPAQTH 376
            |:||..          |:..||..|..|::...:   .|.|||.||.:                 
  Fly    93 TEPRYN----------PVTERPRNPFFPSESTFI---GPQPPPEVPDN----------------- 127

  Fly   377 PPQPHRPTRPQLSPGTSLAASSSSHWPSSTTSTTSSTTSTTTTTTTTRRTTTPTTTT------RR 435
                     |.|.|                      |..||||||||.....|.|:.      |.
  Fly   128 ---------PFLIP----------------------TPRTTTTTTTTTPAPIPDTSAAPLIEPRG 161

  Fly   436 TTTNKP-TRP----------------YQRPTTATSS----SSTSTTSSKTPTTTRPISSSSSSSS 479
            |....| |:|                ..|...||.:    :|.:...:|......|      :..
  Fly   162 TVCRGPDTKPGNCVEIKECASLLNELRSRSQDATFANFLRASNAVCQNKGTQVCCP------TGQ 220

  Fly   480 GIVTSSQRPTQPTHRTPVLATSGIETNEISDSSIPDAGALGHVKTISAARSECGVPTLARPETRI 544
            ||..::..|:|...:         .|:||.             :.:......||  :......:|
  Fly   221 GITNTTPAPSQIVPK---------NTDEIP-------------RRLLNVEEGCG--STVGYFKKI 261

  Fly   545 VGGKSAAFGRWPWQVSVRRTSFFGF----SSTHRCGGALINENWIATAGHCV-DDLLISQIRIRV 604
            |||:.:..|.|||      .:..|:    .|..:|||.||....:.||.||: .||..    :|:
  Fly   262 VGGEVSRKGAWPW------IALLGYDDPSGSPFKCGGTLITARHVLTAAHCIRQDLQF----VRL 316

  Fly   605 GEYDFSHVQEQLPYIERGVAKKVVHPKYSFLTYEYDLALVKLEQPLEFAPHVSPICLPETDSL-- 667
            ||:|.| ...:..:::..:|:.|.||.|:......|:|::.||:.:||...::|||||.|.:|  
  Fly   317 GEHDLS-TDTETGHVDINIARYVSHPDYNRRNGRSDMAILYLERNVEFTSKIAPICLPHTANLRQ 380

  Fly   668 --LIGMNATVTGWGRLSEGGTLPSVLQEVSVPIVSNDNCKSMFMRAGRQEFIPDIF----LCAGY 726
              .:|....|.|||:..|||....||.|:.:||..|..|...:.:..|. |..|.|    ||||.
  Fly   381 KSYVGYMPFVAGWGKTMEGGESAQVLNELQIPIYDNKVCVQSYAKEKRY-FSADQFDKAVLCAGV 444

  Fly   727 ETGGQDSCQGDSGGPLQ-AKSQDG--RFFLAGIISWGIGCAEANLPGVCTRISKFTPWILEHVR 787
            .:||:|:|||||||||. .:...|  ||:|.|::|:|||||..|:|||.:....|..||::.|:
  Fly   445 LSGGKDTCQGDSGGPLMLPEPYQGQLRFYLIGVVSYGIGCARPNVPGVYSSTQYFMDWIIQQVQ 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbNP_476709.1 Tryp_SPc 544..785 CDD:238113 97/256 (38%)
CG1299NP_647862.1 CLIP 37..92 CDD:463440
CLIP 164..216 CDD:463440 8/51 (16%)
Tryp_SPc 261..503 CDD:238113 95/253 (38%)
Blue background indicates that the domain is not in the aligned region.

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