DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sb and Tmprss4

DIOPT Version :10

Sequence 1:NP_476709.1 Gene:Sb / 41958 FlyBaseID:FBgn0003319 Length:787 Species:Drosophila melanogaster
Sequence 2:XP_038937788.1 Gene:Tmprss4 / 367074 RGDID:1305033 Length:478 Species:Rattus norvegicus


Alignment Length:328 Identity:111/328 - (33%)
Similarity:164/328 - (50%) Gaps:35/328 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   460 TSSKTPTTTRPISSSSSSSSGIVTSSQRPTQPTHRTPVLATS-GIETNEISDSSIPDAGALGHVK 523
            |.:...|..|.:..:|..:.|.|  ...|.|....|||...| .::....|.|.:  :|:|    
  Rat   173 TEALAKTACRQMGYNSQPAFGPV--EMGPNQTLLVTPVTGNSQELQMQNGSRSCL--SGSL---- 229

  Fly   524 TISAARSECGVPTLARPETRIVGGKSAAFGRWPWQVSVRRTSFFGFSSTHRCGGALINENWIATA 588
             :|....:||   .:...||:|||..|:...||||||::      ::..|.|||::::.:||.||
  Rat   230 -VSLRCLDCG---KSLKTTRVVGGVEASADSWPWQVSIQ------YNKQHVCGGSILDHHWILTA 284

  Fly   589 GHCVDDLL-ISQIRIRVGEYDFSHVQEQLPYIERGVAK-KVVHPKYSFLTYEYDLALVKLEQPLE 651
            .||....| :|..::|.|.....: ...||..:..:|: ..:.||      |.|:|||||:.||.
  Rat   285 AHCFRKYLDVSSWKVRAGSNKLGN-SPSLPVAKIFIAEPNPLQPK------EKDIALVKLKMPLT 342

  Fly   652 FAPHVSPICLPETDSLLI-GMNATVTGWGRLSE-GGTLPSVLQEVSVPIVSNDNCKSMFMRAGRQ 714
            |:..|.|||||.:|..|| .|...|.|||...| ||.:...|.:.||.::.:..|.:.....|. 
  Rat   343 FSGSVRPICLPFSDEELIPTMPVWVIGWGFTEENGGKMSDTLLQASVQVIDSARCNAEDAYQGE- 406

  Fly   715 EFIPDIFLCAGYETGGQDSCQGDSGGPLQAKSQDGRFFLAGIISWGIGCAEANLPGVCTRISKFT 779
              :....||||...||:|:|||||||||.....  ::.:.||:|||.||...:.|||.|:::.:.
  Rat   407 --VTAGMLCAGTPQGGKDTCQGDSGGPLMYHYD--KWQVVGIVSWGYGCGSPSTPGVYTKVTAYL 467

  Fly   780 PWI 782
            .||
  Rat   468 DWI 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbNP_476709.1 Tryp_SPc 544..785 CDD:238113 90/243 (37%)
Tmprss4XP_038937788.1 LDLa 99..133 CDD:238060
SRCR_2 149..238 CDD:470597 17/73 (23%)
Tryp_SPc 245..470 CDD:214473 89/242 (37%)
Blue background indicates that the domain is not in the aligned region.

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