DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sb and Np

DIOPT Version :10

Sequence 1:NP_476709.1 Gene:Sb / 41958 FlyBaseID:FBgn0003319 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_610437.2 Gene:Np / 35904 FlyBaseID:FBgn0265011 Length:1041 Species:Drosophila melanogaster


Alignment Length:1046 Identity:311/1046 - (29%)
Similarity:417/1046 - (39%) Gaps:377/1046 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 LATAAAALITPPDSLESLGSLGIPSSSASSSEDDDDMSSGFYRIPHRLEGYPQLQQLQRGQNFKI 133
            :||:...|.:...||.:||||.:.::.||....|:                |.|.|.|.|:|  |
  Fly    35 IATSRMPLTSLVFSLLTLGSLMLLTADASPVFVDN----------------PSLAQFQSGRN--I 81

  Fly   134 SPKPC---SFGRVEGTCMFVWECIKSEGKHVGMCVDSFMFGSCC--------------------- 174
            ...||   ..|| .|.|||..:|||..|.|:|.|:|.|.|||||                     
  Fly    82 RHLPCIVRKSGR-SGICMFAIDCIKQNGTHLGTCIDRFYFGSCCAMKEEASLFAPEINDNSIDQN 145

  Fly   175 ------------------------------------THNYTDNIVLPQTAFSYTRPTKPLTLRP- 202
                                                .|::|.|.:|.....||....||..:|. 
  Fly   146 TISHFSHESTTLPTSALFKLTTESSLSSSSSSGSSTAHHHTTNELLKNVTQSYLSTAKPAPVRTT 210

  Fly   203 ---------RPPAA--PYKPMISGMTTIERPHGAGTLVIRPS--GPHHQGTLARP---------- 244
                     |||.|  .:|.....:.|..:|..|.|..|.|:  .|..:.|.|:|          
  Fly   211 SNGTLSTTRRPPLAHTTHKNSHYVVRTTMKPSAAPTTTITPTVKPPRRRTTTAKPVLTTAPIVEQ 275

  Fly   245 -------------------------HPPPYQSKPTTASDLHGSASHPSSSSSSSSSSNPNSIWHT 284
                                     .|...|...||.:..|   :.|:.|||.:|.:...:...|
  Fly   276 RIETTSVPTKFVTFQIVETTTPAVTEPTHQQETTTTTTRRH---TRPTGSSSVASRTTSKTTTTT 337

  Fly   285 STQQQQQQQHQQNQQNHWQMTTEPSFITKPRPTGWTKPGIVNLPMPARPSKPSK--------PTK 341
            :|..................||:       |||.         |:....|||.|        |.|
  Fly   338 TTTTTTTAAPPTTTSTRAATTTQ-------RPTP---------PLRTTTSKPHKTHSSRRPAPAK 386

  Fly   342 KPI----------------------------------VYDRTPPPPPSVPPSTSTSTTS------ 366
            ||:                                  :..|.|....|...:|:|||||      
  Fly   387 KPVSTTTTTASGTQSTRKPADSLASGSTTANGTTATTLPARRPVTQTSSSSTTTTSTTSTITTTV 451

  Fly   367 ----------TSLIWPAQTHPPQPH---------------RPTRPQLSPGTSLAASSSSHWPSST 406
                      |:.:....|..|:|.               .||...::.|:|.::|||...|:|:
  Fly   452 FKDELPKNRTTTRLPERTTQAPRPRPKPTGEIVKVPALLAEPTTTTVTKGSSSSSSSSPKPPASS 516

  Fly   407 T---------------STTSSTTSTTTTTTT---TRRTTTPTTTTRRTTTNKPTRPYQRPTTAT- 452
            |               :||::||:|||||||   ||||..|||||  |||.|.|....:.||.| 
  Fly   517 TTPLVTKKKPTTTNAPTTTTTTTTTTTTTTTPKPTRRTKPPTTTT--TTTTKATTTTTKATTTTT 579

  Fly   453 -----------SSSSTSTTSSKT--------------------------PTTTRPISSSSSSSSG 480
                       :|:..:||:.||                          |:...|:::.||.::.
  Fly   580 TAKPLITTEPPTSAPLTTTTKKTGLITWTDVEAEPPTNASISNDWQPAPPSNWLPLTTESSETAD 644

  Fly   481 IVTSSQRP--------------------------------------TQPTHRTPVLATSGIETNE 507
            ..::|..|                                      .:||..|...||:.::|.|
  Fly   645 KTSASTAPPSATDKVVISVATSVSEVETHGPGKPQKTTKPPKPSSTAKPTTTTTAAATTIVKTTE 709

  Fly   508 ISDSSIPDAGA------LG--------------------------------HVKTISAARSECGV 534
            ...|||..|.:      ||                                :..||.|..|....
  Fly   710 APASSIELASSTSSYTDLGSDLAASSSSSTTTTTSSPTTAAETTDYSGEEPNTTTIEATGSTTVA 774

  Fly   535 PTLAR--------------PETRIVGGKSAAFGRWPWQVSVR--RTSFFGFSSTHRCGGALINEN 583
            |..|.              ||.|||||.:|||||||||:|:|  |||.:    .|:||.||:|||
  Fly   775 PANALEGVDYKEVCGRRMFPEPRIVGGANAAFGRWPWQISLRQWRTSTY----LHKCGAALLNEN 835

  Fly   584 WIATAGHCVDDLLISQIRIRVGEYDFSHVQEQLPYIERGVAKKVVHPKYSFLTYEYDLALVKLEQ 648
            |..||.||||::..|.:.:|:||||.:..:|...|.||.|.....||::...|:||||||::..:
  Fly   836 WAITAAHCVDNVPPSDLLLRLGEYDLAEEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYE 900

  Fly   649 PLEFAPHVSPICLPETDSLLIGMNATVTGWGRLSEGGTLPSVLQEVSVPIVSNDNCKSMFMRAGR 713
            |:.|.|::.|:|:|:.|...||..|.|||||||.|.|.||||||||:||:::|..|:||:..||.
  Fly   901 PVIFQPNIIPVCVPDNDENFIGQTAFVTGWGRLYEDGPLPSVLQEVAVPVINNTICESMYRSAGY 965

  Fly   714 QEFIPDIFLCAGYETGGQDSCQGDSGGP--LQAKSQDGRFFLAGIISWGIGCAEANLPGVCTRIS 776
            .|.||.||:|||::.||.|||:||||||  ||.:| |.||.|.|:|||||||||||.|||.||||
  Fly   966 IEHIPHIFICAGWKKGGYDSCEGDSGGPMVLQRES-DKRFHLGGVISWGIGCAEANQPGVYTRIS 1029

  Fly   777 KFTPWI 782
            :|..||
  Fly  1030 EFRDWI 1035

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbNP_476709.1 Tryp_SPc 544..785 CDD:238113 136/243 (56%)
NpNP_610437.2 Tryp_SPc 798..1038 CDD:238113 136/243 (56%)

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