DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sb and Corin

DIOPT Version :10

Sequence 1:NP_476709.1 Gene:Sb / 41958 FlyBaseID:FBgn0003319 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster


Alignment Length:371 Identity:107/371 - (28%)
Similarity:169/371 - (45%) Gaps:90/371 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   469 RPISSSSSSS---SGIVTSSQRPTQPTHRTPVLATSGIETN--------------------EISD 510
            |.:|.|:..|   ...|.::...||.||| |:|||..:.|:                    :..|
  Fly  1014 RAVSPSAVCSILGYSAVNATSVLTQLTHR-PLLATVNVSTDIWKMYAKRKSTLMQEFANCKKTED 1077

  Fly   511 SSIPDAGALGHVKTISAARSECGVPTLAR--PETRIVGGKSAAFGRWPWQVSVRRTSFFGFSSTH 573
            ..:.|         ::.:..|||.....|  |..||:||..|:.|.||:..::    ..|.....
  Fly  1078 YPMAD---------LTCSNYECGRVKRGRHKPSRRIIGGTQASPGNWPFLAAI----LGGPEKIF 1129

  Fly   574 RCGGALINENWIATAGHCVDDLLISQIRIRVGEYDFSHVQEQLPYIERGVAKK------------ 626
            .|.|.||::.|:.||.||            ||.|....:::..  |:.||.::            
  Fly  1130 YCAGVLISDQWVLTASHC------------VGNYSVIDLEDWT--IQLGVTRRNSFTYSGQKVKV 1180

  Fly   627 ---VVHPKYSF-LTYEYDLALVKLEQPLEFAPHVSPICL--PETDSLLIGMNATVTGWGRLSE-- 683
               :.||:|:. :.::.|:||.:|...:.|..|:.|:||  |...:|..|...||.|||:..:  
  Fly  1181 KAVIPHPQYNMAIAHDNDIALFQLATRVAFHEHLLPVCLPPPSVRNLHPGTLCTVIGWGKREDKD 1245

  Fly   684 -GGTLPSVLQEVSVPIVSNDNCKSMFMRAGRQEFIPDI-----FLCAGYETGGQDSCQGDSGGPL 742
             ..|...::.||.|||::.:.|         .|::.::     .:|||::.||:|:|||||||||
  Fly  1246 PKSTYEYIVNEVQVPIITRNQC---------DEWLDNLTVSEGMVCAGFDDGGKDACQGDSGGPL 1301

  Fly   743 QA--KSQDGRFFLAGIISWGIGCAEANLPGVCTRISKFTPWILEHV 786
            ..  ..:..|:|:.||:||||.||...||||...:.::.|||.|.:
  Fly  1302 LCPYPGEKNRWFVGGIVSWGIMCAHPRLPGVYANVVQYVPWIQEQI 1347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbNP_476709.1 Tryp_SPc 544..785 CDD:238113 83/268 (31%)
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060
SR 980..>1034 CDD:214555 5/19 (26%)
Tryp_SPc 1104..1346 CDD:238113 83/268 (31%)
Blue background indicates that the domain is not in the aligned region.

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