DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sb and l(2)k05911

DIOPT Version :9

Sequence 1:NP_001287355.1 Gene:Sb / 41958 FlyBaseID:FBgn0003319 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_723797.3 Gene:l(2)k05911 / 34731 FlyBaseID:FBgn0284244 Length:639 Species:Drosophila melanogaster


Alignment Length:709 Identity:182/709 - (25%)
Similarity:267/709 - (37%) Gaps:229/709 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 FYRIPHRLEGYPQLQQLQRGQNFKISPKPCSF----GRVEGTCMFVWECIKSEGKHVGMCVDSFM 169
            :||:..::..: .|:|..:.....::...|:|    |||..                        
  Fly   130 YYRLARQISIF-TLRQWPQANGLGLNGNMCNFFDMLGRVNN------------------------ 169

  Fly   170 FGSCCTH---NYTDNIVLPQTAFSYTRPTKPLTLRPRPPAAPYKPMISGMTTIERPHGAGTLVIR 231
             |.|||.   |......||.|..:.|                        ||.|.|    ::|..
  Fly   170 -GICCTDIDANSFGVFPLPGTTTTTT------------------------TTTEMP----SVVAD 205

  Fly   232 PSGPHH---QGTLARPHPPPYQSKPTTASDLHGSASHPSSSSSSSSSSNPNSIWHTSTQQQQQQQ 293
            .....|   :|.:...:||..........:.:.....|.....::...||               
  Fly   206 EEDREHVIPEGEVEGVYPPDVPRPEEPIDNANSVEDTPDFQDINTIEGNP--------------- 255

  Fly   294 HQQNQQNHWQMTTEPSFITKP--RPTGWTKPGIVNLPMPARPSKPSKPTKKP---IVYDRTPPPP 353
                          |....||  .|.|  :|  |..|:..:|:....|.:.|   ....:.||..
  Fly   256 --------------PGADKKPEAEPVG--EP--VEQPISTQPASTIHPYQWPFGSFAGGQWPPAL 302

  Fly   354 PSVPPSTSTSTTSTSLIW--PAQTHPPQPHRPTRPQLSPGTSLAASSSSHWPSSTTSTTSSTTST 416
            |:.||:|..        |  |..||||..|.||.|                             |
  Fly   303 PTHPPTTGG--------WPPPLPTHPPNHHYPTHP-----------------------------T 330

  Fly   417 TTTTTTTRRTT-TPTTTTRRTTTNKPTRP-YQRPTTATSSSSTSTTSSKTPTTTRPISSSSSSSS 479
            |....:|:||| .||:..|.|||.:||.| |..|.|.|:            ||.||:  |.:||.
  Fly   331 TGGVPSTKRTTPRPTSPARPTTTRRPTYPSYPSPVTTTT------------TTRRPV--SGTSSE 381

  Fly   480 GIVTSSQRPTQPTHRTPVLATSGIETNEISDSSIPDAGALGHVKTISAARSECGVPTLARPETRI 544
            |:      |.|..::.||               .||                         :.||
  Fly   382 GL------PLQCGNKNPV---------------TPD-------------------------QERI 400

  Fly   545 VGGKSAAFGRWPWQVSVRRTSFFGFSSTHRCGGALINENWIATAGHCVDDLL---ISQIRIRVGE 606
            |||.:|:...:||...:.:      |....|||:||..:.|.||.|||..:.   ::.:...:|:
  Fly   401 VGGINASPHEFPWIAVLFK------SGKQFCGGSLITNSHILTAAHCVARMTSWDVAALTAHLGD 459

  Fly   607 Y----DFSHVQEQLPYIERGVAKKVVHPKYSFLTYEYDLALVKLEQPLEFAPHVSPICLPETDS- 666
            |    ||     ::.::.|.:.:.|.|..:.|.|...|:|::.|.:|:.|...:.|||||.:.| 
  Fly   460 YNIGTDF-----EVQHVSRRIKRLVRHKGFEFSTLHNDVAILTLSEPVPFTREIQPICLPTSPSQ 519

  Fly   667 ---LLIGMNATVTGWGRLSEGGTLPSVLQEVSVPIVSNDNCKSMFMRAGRQEFIPDIFLCAGYET 728
               ...|..|||.|||.|.|.|..||:||:|.:||.:|..|...:.||.....| :..:|||  .
  Fly   520 QSRSYSGQVATVAGWGSLRENGPQPSILQKVDIPIWTNAECARKYGRAAPGGII-ESMICAG--Q 581

  Fly   729 GGQDSCQGDSGGPLQAKSQDGRFFLAGIISWGIGCAEANLPGVCTRISKFTPWILEHVR 787
            ..:|||.||||||: ..:..||:...||:||||||.:...|||.||::...|||.::::
  Fly   582 AAKDSCSGDSGGPM-VINDGGRYTQVGIVSWGIGCGKGQYPGVYTRVTSLLPWIYKNIK 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbNP_001287355.1 Tryp_SPc 543..782 CDD:214473 90/249 (36%)
Tryp_SPc 544..785 CDD:238113 91/251 (36%)
l(2)k05911NP_723797.3 CLIP 111..174 CDD:197829 11/69 (16%)
Tryp_SPc 399..634 CDD:214473 90/249 (36%)
Tryp_SPc 400..637 CDD:238113 91/251 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 147 1.000 Domainoid score I2768
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100031
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.810

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