DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sb and Tmprss11b

DIOPT Version :9

Sequence 1:NP_001287355.1 Gene:Sb / 41958 FlyBaseID:FBgn0003319 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_795998.2 Gene:Tmprss11b / 319875 MGIID:2442893 Length:416 Species:Mus musculus


Alignment Length:291 Identity:98/291 - (33%)
Similarity:143/291 - (49%) Gaps:31/291 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   503 IETNEISDSSIPDAGALGHVKTISAAR---SECG-VPTLARPETRIVGGKSAAFGRWPWQVSVRR 563
            :|.|..|.::.|.:..|..:..:.|.:   :.|| .|.::....||.||.:|..|.||||.|:| 
Mouse   140 LENNPESLTTDPGSLKLTEISKVDAEKIINNRCGRRPRMSATYDRITGGSTAHKGEWPWQASLR- 203

  Fly   564 TSFFGFSSTHRCGGALINENWIATAGHCVD------DLLISQIRIRVGEYDFSHVQEQLPYIERG 622
                 .:..|.||.:||.|.::.||.||..      :|.:| ...||..          .|::..
Mouse   204 -----VNGKHYCGASLIGERFLLTAAHCFQGTNNPKNLTVS-FGTRVTP----------AYMQHS 252

  Fly   623 VAKKVVHPKYSFLTYEYDLALVKLEQPLEFAPHVSPICLPETDSLL-IGMNATVTGWGRLSEGGT 686
            |.:.::|..|....:..|:|::||.:.:.|...|..:||||:..:. .|....|||||..|..|.
Mouse   253 VQEIIIHEDYVKGEHHDDVAVIKLTEKVSFNNDVHRVCLPESTQIFPPGEGVVVTGWGSFSYNGK 317

  Fly   687 LPSVLQEVSVPIVSNDNCKSMFMRAGRQEFIPDIFLCAGYETGGQDSCQGDSGGPLQAKSQDGRF 751
            .|.:||:.|:.|:..:.|.|.....||   |.|..|||||..|..|:|||||||||...:....:
Mouse   318 SPLLLQKASIKIIDTNTCNSEEAYGGR---IVDTMLCAGYLEGSIDACQGDSGGPLVHPNSRDIW 379

  Fly   752 FLAGIISWGIGCAEANLPGVCTRISKFTPWI 782
            :|.||:|||..|...|.|||..|::.:..||
Mouse   380 YLVGIVSWGHECGRVNKPGVYMRVTSYRNWI 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbNP_001287355.1 Tryp_SPc 543..782 CDD:214473 87/245 (36%)
Tryp_SPc 544..785 CDD:238113 88/246 (36%)
Tmprss11bNP_795998.2 SEA 46..140 CDD:279699 98/291 (34%)
Tryp_SPc 184..410 CDD:214473 87/245 (36%)
Tryp_SPc 185..413 CDD:238113 88/246 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834034
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.