DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sb and CG32260

DIOPT Version :9

Sequence 1:NP_001287355.1 Gene:Sb / 41958 FlyBaseID:FBgn0003319 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_728942.1 Gene:CG32260 / 317943 FlyBaseID:FBgn0052260 Length:575 Species:Drosophila melanogaster


Alignment Length:591 Identity:162/591 - (27%)
Similarity:238/591 - (40%) Gaps:165/591 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   318 GWT---KPG---IVNLPMPARPSKPSKPTKKPIVYDRTPPPP-----PSVPPSTSTSTTSTSLIW 371
            ||.   .||   |..||.|..|..|:.|         .||||     |.:||..:..:| .::|.
  Fly    25 GWCPLYPPGYYPIYALPPPQGPPYPAPP---------PPPPPFQPIGPLIPPQPALPST-PAVIP 79

  Fly   372 PAQTHPPQPHRPTRPQLSPGTSLAASSSSHWPSSTTSTTSSTTSTTTTTTTTRRTTT-----PTT 431
            ..|..||.|..|..|.|.              ::::||||||||||..||||...||     ||.
  Fly    80 TFQPTPPNPQTPVTPPLI--------------TTSSSTTSSTTSTTGLTTTTTAGTTLPLPMPTC 130

  Fly   432 TTR--------------------RTTTNKP------------------------TRPYQRPTTAT 452
            .::                    |...|.|                        .|..:||.:. 
  Fly   131 PSQPLVCLTGGARPLPNCPCIDPRQQQNSPLLSSTGPQIGSDMMVFMPLNSGRRRRRRRRPQSC- 194

  Fly   453 SSSSTSTTSSKTPTTTRP--------------------ISSSSSSSSGIVTSSQRPTQPTHRTPV 497
             ..:.|...|..|.|:.|                    |.....|:..:..::.|......|..|
  Fly   195 -QDARSRPGSCLPLTSCPQLMQEYQGQANEFHTFLGQSICGFDGSTFMVCCATDRSGNARSRKDV 258

  Fly   498 LATSG-----IETNEISDSS------IPDAGALGHVKTIS------------AAR--SECGVPTL 537
            ..|:.     ...:.:|..|      ......|..|.:.|            |.|  :.||:.  
  Fly   259 FVTTAAPFGFFHFSPLSGGSTATPMVFQPTPPLSQVVSPSFYPPPPPPPPNNAPRESATCGIS-- 321

  Fly   538 ARPETRIVGGKSAAFGRWPWQVSVRRTSFFGFSSTHR----CGGALINENWIATAGHCVDDLLIS 598
            .....|:|||..|..|.:||   :....:|..::.:.    |||:||:..::.|:.||::.:|  
  Fly   322 GATSNRVVGGMEARKGAYPW---IAALGYFEENNRNALKFLCGGSLIHSRYVITSAHCINPML-- 381

  Fly   599 QIRIRVGEYDFSHVQEQLPYIERGVAKKVVHPKYSFLTYEYDLALVKLEQPLEFAPHVSPICLPE 663
             ..:|:|.:|.|...|. ..::..:.:.|||..:...:...|:||::|........::|||||||
  Fly   382 -TLVRLGAHDLSQPAES-GAMDLRIRRTVVHEHFDLNSISNDIALIELNVVGALPGNISPICLPE 444

  Fly   664 TDSLL----IGMNATVTGWGRLSEGGTLPSVLQEVSVPIVSNDNC----KSMFMRAGRQEFI--P 718
            ....:    :|||..|.|||.:...|....||::..|||||..:|    ||:|      :|:  .
  Fly   445 AAKFMQQDFVGMNPFVAGWGAVKHQGVTSQVLRDAQVPIVSRHSCEQSYKSIF------QFVQFS 503

  Fly   719 DIFLCAGYETGGQDSCQGDSGGPLQAKSQDG---RFFLAGIISWGIGCAEANLPGVCTRISKFTP 780
            |..||||  :...|:|||||||||.....:|   ||:|.|::|:|..||..|.|||.||::.:.|
  Fly   504 DKVLCAG--SSSVDACQGDSGGPLMMPQLEGNVYRFYLLGLVSFGYECARPNFPGVYTRVASYVP 566

  Fly   781 WILEHV 786
            ||.:|:
  Fly   567 WIKKHI 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbNP_001287355.1 Tryp_SPc 543..782 CDD:214473 88/255 (35%)
Tryp_SPc 544..785 CDD:238113 89/257 (35%)
CG32260NP_728942.1 CLIP 194..244 CDD:288855 7/51 (14%)
Tryp_SPc 327..568 CDD:214473 88/255 (35%)
Tryp_SPc 328..571 CDD:238113 89/257 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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