DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sb and Tmprss3

DIOPT Version :10

Sequence 1:NP_476709.1 Gene:Sb / 41958 FlyBaseID:FBgn0003319 Length:787 Species:Drosophila melanogaster
Sequence 2:XP_038954650.1 Gene:Tmprss3 / 309665 RGDID:1310135 Length:454 Species:Rattus norvegicus


Alignment Length:277 Identity:112/277 - (40%)
Similarity:145/277 - (52%) Gaps:35/277 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   520 GHVKTISAARSECGVPTLARPETRIVGGKSAAFGRWPWQVSVRRTSFFGFSSTHRCGGALINENW 584
            |||.|:..  |.||:.|...|  |||||..::..:||||||::      |...|.|||::|...|
  Rat   197 GHVVTLKC--SACGMRTGYSP--RIVGGNVSSLTQWPWQVSLQ------FQGYHLCGGSVITPLW 251

  Fly   585 IATAGHCVDDLLISQI-RIRVGEYDF------SHVQEQLPYIERGVAKKVVHPKYSFLTYEYDLA 642
            |.||.|||.||...:. .::||....      ||:.|::.|          |.||.......|:|
  Rat   252 IVTAAHCVYDLYHPKSWTVQVGLVSLMDSPVPSHLVEKIIY----------HSKYKPKRLGNDIA 306

  Fly   643 LVKLEQPLEFAPHVSPICLPET-DSLLIGMNATVTGWGRLSEG-GTLPSVLQEVSVPIVSNDNCK 705
            |:||.:||.|...:.|||||.: ::...|.....:|||...:| |....||...:||::||..|.
  Rat   307 LMKLSEPLTFDETIQPICLPNSEENFPDGKLCWTSGWGATEDGAGDASPVLNHAAVPLISNKICN 371

  Fly   706 SMFMRAGRQEFIPDIFLCAGYETGGQDSCQGDSGGPLQAKSQDGRFF-LAGIISWGIGCAEANLP 769
            ...:..|   .|....|||||..||.|||||||||||..  |:.|.: |.|..|:||||||.|.|
  Rat   372 HRDVYGG---IISPSMLCAGYLKGGVDSCQGDSGGPLVC--QERRLWKLVGATSFGIGCAEVNKP 431

  Fly   770 GVCTRISKFTPWILEHV 786
            ||.|||:.|..||.|.:
  Rat   432 GVYTRITSFLDWIHEQL 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbNP_476709.1 Tryp_SPc 544..785 CDD:238113 101/250 (40%)
Tmprss3XP_038954650.1 LDLa 74..107 CDD:238060
SRCR_2 112..211 CDD:464747 7/15 (47%)
Tryp_SPc 216..444 CDD:214473 100/248 (40%)
Blue background indicates that the domain is not in the aligned region.

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