DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sb and Ovch2

DIOPT Version :10

Sequence 1:NP_476709.1 Gene:Sb / 41958 FlyBaseID:FBgn0003319 Length:787 Species:Drosophila melanogaster
Sequence 2:XP_003749007.2 Gene:Ovch2 / 308919 RGDID:1564636 Length:579 Species:Rattus norvegicus


Alignment Length:292 Identity:109/292 - (37%)
Similarity:164/292 - (56%) Gaps:36/292 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   520 GHVKTISAARS-ECGVPTLARP--------ETRIVGGKSAAFGRWPWQVSVRRTSFFGFSSTHRC 575
            ||..|:|:.|: :|| .:|.:|        .:|||||.....|.:|||||:::      ...|.|
  Rat    20 GHSATLSSIRAPDCG-KSLVKPWPQNYFSLFSRIVGGSQVEKGSYPWQVSLKQ------KQKHIC 77

  Fly   576 GGALINENWIATAGHCVDDLLIS-QIRIRVGEYDFSHVQ--EQLPYIERGVAKKVVHPKYSF-LT 636
            ||.:|:..|:.||.||:.:..|: .:.:..||:|.|..:  ||...||    ..::||::|. ..
  Rat    78 GGTIISSQWVITAAHCMANRNIALTLNVTAGEHDLSQAEPGEQTLAIE----TIIIHPQFSTKKP 138

  Fly   637 YEYDLALVKLEQPLEFAPHVSPICLPET-DSLLIGMNATVTGWGRLSEGGTLPSVLQEVSVPIVS 700
            ..||:||:|:....:|...|.|:||||. :....|...|..|||||||||:||.|||:|::||::
  Rat   139 MNYDIALLKMVGTFQFGQFVRPVCLPEPGEQFNAGYICTTAGWGRLSEGGSLPQVLQQVNLPILT 203

  Fly   701 NDNCKSMFMRAGRQEFIPDIFLCAGYETGGQDSCQGDSGGPLQAKSQDGRFFLAGIISWGIGCA- 764
            ::.|:::.:.. |.......|||.|...||:|:|||||||.|..:::.|.:.|||:.|||:||. 
  Rat   204 HEECEAVMLTL-RNPITGKTFLCTGSPDGGRDACQGDSGGSLMCQNRKGAWTLAGVTSWGLGCGR 267

  Fly   765 ---------EANLPGVCTRISKFTPWILEHVR 787
                     |...||:.|.:.:..|||.|||:
  Rat   268 SWRNNARKKEQGSPGIFTDLRRVLPWIHEHVQ 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbNP_476709.1 Tryp_SPc 544..785 CDD:238113 96/255 (38%)
Ovch2XP_003749007.2 Tryp_SPc 52..297 CDD:238113 96/255 (38%)
CUB 317..420 CDD:238001
CUB 431..541 CDD:238001
Blue background indicates that the domain is not in the aligned region.

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