DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sb and Tmprss13

DIOPT Version :10

Sequence 1:NP_476709.1 Gene:Sb / 41958 FlyBaseID:FBgn0003319 Length:787 Species:Drosophila melanogaster
Sequence 2:XP_063121182.1 Gene:Tmprss13 / 300682 RGDID:1310872 Length:552 Species:Rattus norvegicus


Alignment Length:573 Identity:154/573 - (26%)
Similarity:228/573 - (39%) Gaps:164/573 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   330 PARPSKPSKPTK-----KPIVYDRTPPPPPSVPPSTSTSTTSTSLIWPAQTHPPQ--PHRPTRPQ 387
            |||||..:.|.:     .|.   |||||..|                ||:..|||  |.|.:..:
  Rat    11 PARPSPQASPARASPQASPA---RTPPPQAS----------------PARASPPQASPARASPAR 56

  Fly   388 LSPGTSLAASSSSHWPSSTTSTTSSTTSTTTTTTTTRRT----TTPTTTTRRTTTNKPTRPYQRP 448
            .||   :.||.:...||.::|..||:..:.:||::..|.    ..|..|..|.:   |.|  ..|
  Rat    57 ASP---VRASPARAPPSRSSSGRSSSARSASTTSSPTRVYLVRAIPVGTVIRAS---PAR--SAP 113

  Fly   449 TTATSSSSTSTT---------------------------------SSKTPTTTR----------- 469
            .|..:..|...:                                 ..:.|.:.|           
  Rat   114 ATRATRESPGLSFPKFSWQETQRQLPLIGCVLLLISLVISLILLYGGREPQSPRGIAVYFWRGHT 178

  Fly   470 ------PISSSS----------------------------------SSSSG----IVTSSQRPTQ 490
                  |:.|..                                  |.|||    :.:||...|.
  Rat   179 GIKYKEPLESCPKHAVRCDGVVDCKMKSDELGCVRFDWDKSLLKVYSGSSGEWLPVCSSSWNDTD 243

  Fly   491 PTHRTPVLA-TSGIETNEISDSSIPDAGALGHVKTI---SAARSECGVPT------------LAR 539
            .......|. .|...|.|::...:..:..|....:.   |..||||  |:            |..
  Rat   244 SERTCQQLGFDSAYRTTEVAHRDVTSSFLLSEYNSTIQESLTRSEC--PSRRYVSLQCAHCGLRA 306

  Fly   540 PETRIVGGKSAAFGRWPWQVSVRRTSFFGFSSTHRCGGALINENWIATAGHCVDDLLISQIRIRV 604
            ...|||||...:..:||||||:.      |.:||.|||.||:..|:.||.||   ..:::.:|..
  Rat   307 MTGRIVGGALTSESKWPWQVSLH------FGTTHICGGTLIDAQWVLTAAHC---FFVTREKILE 362

  Fly   605 G--EYDFSHVQEQLPYIERGVAKKVVHPKYSFLTYEYDLALVKLEQPLEFAPHVSPICLPETDSL 667
            |  .|..:....|||. ...:::.:::..|:....:||:|||:|.:||..:.|:.|.||| ....
  Rat   363 GWKVYAGTSNLHQLPE-AASISQIIINGNYTDEQDDYDIALVRLSKPLTLSAHIHPACLP-LHGQ 425

  Fly   668 LIGMNAT--VTGWGRLSEGGTLPS-VLQEVSVPIVSNDNCKSMFMRAGRQEFIPDIFLCAGYETG 729
            ..|:|.|  :||:|:..|.....| .|:||.|.::....|....:   ...::....:|||...|
  Rat   426 TFGLNETCWITGFGKTKETDEKTSPFLREVQVNLIDFKKCNDYLV---YDSYLTPRMMCAGDLRG 487

  Fly   730 GQDSCQGDSGGPLQAKSQDGRFFLAGIISWGIGCAEANLPGVCTRISKFTPWI 782
            |:|||||||||||..: |:.|::|||:.|||.||.:.|.|||.|::::..|||
  Rat   488 GRDSCQGDSGGPLVCE-QNNRWYLAGVTSWGTGCGQKNKPGVYTKVTEVLPWI 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbNP_476709.1 Tryp_SPc 544..785 CDD:238113 90/244 (37%)
Tmprss13XP_063121182.1 None

Return to query results.
Submit another query.