DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sb and Hpn

DIOPT Version :9

Sequence 1:NP_001287355.1 Gene:Sb / 41958 FlyBaseID:FBgn0003319 Length:787 Species:Drosophila melanogaster
Sequence 2:XP_038958880.1 Gene:Hpn / 29135 RGDID:61982 Length:559 Species:Rattus norvegicus


Alignment Length:453 Identity:133/453 - (29%)
Similarity:189/453 - (41%) Gaps:125/453 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   434 RRTTTNKPTRPYQRPTTATSSSSTSTTSSKT-PTTTRP------------ISSSSSSSSGIVT-- 483
            |:.|...||.........:..|..|....:| |..:||            ::...::|..|||  
  Rat    20 RQGTGPVPTTCCAEDQAGSGPSLLSVAGGRTAPCCSRPKVAALTVGTLLFLTGIGAASWAIVTIL 84

  Fly   484 --SSQRPTQPTHRTP----------------VLATS-------GIETNEI--------SDSSIPD 515
              |.|.|......:|                :|.:|       |:...|:        |:..:..
  Rat    85 LRSDQEPLYQVQLSPGDSRLLVLDKTEGTWRLLCSSRSNARVAGLGCEEMGFLRALAHSELDVRT 149

  Fly   516 AGALG----------------------------HVKTISAARSECGVPTLARPETRIVGGKSAAF 552
            |||.|                            ..:.::|...:||...|  |..|||||:.::.
  Rat   150 AGANGTSGFFCVDEGGLPLAQRLLDVISVCDCPRGRFLTATCQDCGRRKL--PVDRIVGGQDSSL 212

  Fly   553 GRWPWQVSVRRTSFFGFSSTHRCGGALINENWIATAGHCVDD--LLISQIRIRVGEYDFSHVQEQ 615
            ||||||||:|      :..||.|||:|::.:|:.||.||..:  .::|:.|:..|.     |...
  Rat   213 GRWPWQVSLR------YDGTHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGA-----VART 266

  Fly   616 LPY-IERGVAKKVVHPKYSFLTY--------EYDLALVKLEQPLEFAPHVSPICLPETDSLLI-G 670
            .|: ::.||...:.|..|  |.:        ..|:|||.|...|....::.|:|||.....|: |
  Rat   267 SPHAVQLGVQAVIYHGGY--LPFRDPTIDENSNDIALVHLSSSLPLTEYIQPVCLPAAGQALVDG 329

  Fly   671 MNATVTGWGRLSEGGTLPSVLQEVSVPIVSNDNCKSMFMRAGRQEFIPDIF--------LCAGYE 727
            ...||||||.....|....||||..|||:||:.|.|           ||.:        .||||.
  Rat   330 KVCTVTGWGNTQFYGQQAVVLQEARVPIISNEVCNS-----------PDFYGNQIKPKMFCAGYP 383

  Fly   728 TGGQDSCQGDSGGPLQAK---SQDGRFFLAGIISWGIGCAEANLPGVCTRISKFTPWILEHVR 787
            .||.|:||||||||...:   |...|:.|.||:|||.|||.|..|||.|::..|..||.:.::
  Rat   384 EGGIDACQGDSGGPFVCEDRISGTSRWRLCGIVSWGTGCALARKPGVYTKVIDFREWIFQAIK 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbNP_001287355.1 Tryp_SPc 543..782 CDD:214473 99/261 (38%)
Tryp_SPc 544..785 CDD:238113 100/263 (38%)
HpnXP_038958880.1 Hepsin-SRCR 92..200 CDD:401275 14/109 (13%)
Tryp_SPc 204..441 CDD:238113 98/260 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337579
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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