DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sb and Tmprss13

DIOPT Version :9

Sequence 1:NP_001287355.1 Gene:Sb / 41958 FlyBaseID:FBgn0003319 Length:787 Species:Drosophila melanogaster
Sequence 2:XP_006510195.1 Gene:Tmprss13 / 214531 MGIID:2682935 Length:561 Species:Mus musculus


Alignment Length:571 Identity:157/571 - (27%)
Similarity:226/571 - (39%) Gaps:151/571 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   330 PAR-PSKPSKPTKKPIVYDRTPP--PPPSVPPSTSTSTTSTSLIWPAQTHPPQ--PHRPTRPQLS 389
            ||| |.:.|.....|.   |.||  .|...||..|.:.|           |||  |.|...||.|
Mouse    11 PARTPPQASPARTSPA---RAPPQASPARTPPQASPTRT-----------PPQASPARAPPPQAS 61

  Fly   390 PG-TSLAASSSSHWPSSTTST--TSSTTSTTTTTTTTR-------------------RTTTPTTT 432
            |. .|.|.:|.:..|.|.:|:  :||..|.:||::.||                   |:...|..
Mouse    62 PARASPARASLARAPPSRSSSGRSSSARSASTTSSPTRVYLVRATPVGAVPIRASPARSAPATRA 126

  Fly   433 TR-------------RTTTNKPT--------------------RPYQRP--TTATSSSSTSTTSS 462
            ||             .|....|.                    |..|.|  |........:....
Mouse   127 TRESPGLSFPKFSWQETQRQLPLIGCVILLISLVISLILLYGGRETQSPRGTAVYFWRGHTGIKY 191

  Fly   463 KTPTTTRPISSSS-----------------------------SSSSG----IVTSSQRPTQPTHR 494
            |.|..:.||.:..                             |.|||    :.:||...|.....
Mouse   192 KEPLESCPIHAVRCDGVVDCKMKSDELGCVRFDWDKSLLKVYSGSSGEWLPVCSSSWNDTDSKRT 256

  Fly   495 TPVLA-TSGIETNEISDSSIPDAGALGHVKT----------------ISAARSECGVPTLARPET 542
            ...|. .|...|.|::...|..:..|....|                :|...|.||:..:.   .
Mouse   257 CQQLGFDSAYRTTEVAHRDITSSFLLSEYNTTIQESLYRSQCPSRRYVSLQCSHCGLRAMT---G 318

  Fly   543 RIVGGKSAAFGRWPWQVSVRRTSFFGFSSTHRCGGALINENWIATAGHC---VDDLLISQIRIRV 604
            |||||...:..:||||||:.      |.:||.|||.||:..|:.||.||   ..:.|:...::..
Mouse   319 RIVGGALTSESKWPWQVSLH------FGTTHICGGTLIDAQWVLTAAHCFFVTREKLLEGWKVYA 377

  Fly   605 GEYDFSHVQEQLPYIERGVAKKVVHPKYSFLTYEYDLALVKLEQPLEFAPHVSPICLPETDSLLI 669
            |..:.    .|||. ...:::.:::..|:....:||:||::|.:||..:.|:.|.||| ......
Mouse   378 GTSNL----HQLPE-AASISQIIINGNYTDEQDDYDIALIRLSKPLTLSAHIHPACLP-MHGQTF 436

  Fly   670 GMNAT--VTGWGRLSEGGTLPS-VLQEVSVPIVSNDNCKSMFMRAGRQEFIPDIFLCAGYETGGQ 731
            |:|.|  :||:|:..|.....| .|:||.|.::....|....:   ...::....:|||...||:
Mouse   437 GLNETCWITGFGKTKETDEKTSPFLREVQVNLIDFKKCNDYLV---YDSYLTPRMMCAGDLRGGR 498

  Fly   732 DSCQGDSGGPLQAKSQDGRFFLAGIISWGIGCAEANLPGVCTRISKFTPWI 782
            |||||||||||..: |:.|::|||:.|||.||.:.|.|||.|::::..|||
Mouse   499 DSCQGDSGGPLVCE-QNNRWYLAGVTSWGTGCGQKNKPGVYTKVTEVLPWI 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbNP_001287355.1 Tryp_SPc 543..782 CDD:214473 87/244 (36%)
Tryp_SPc 544..785 CDD:238113 88/245 (36%)
Tmprss13XP_006510195.1 PHA03378 <6..>122 CDD:223065 37/124 (30%)
LDLa <204..220 CDD:238060 0/15 (0%)
SRCR_2 225..314 CDD:373897 18/88 (20%)
Tryp_SPc 319..548 CDD:214473 87/244 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834019
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 198 1.000 Inparanoid score I3792
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8807
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.890

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