DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sb and Tmprss11a

DIOPT Version :9

Sequence 1:NP_001287355.1 Gene:Sb / 41958 FlyBaseID:FBgn0003319 Length:787 Species:Drosophila melanogaster
Sequence 2:XP_006534903.1 Gene:Tmprss11a / 194597 MGIID:2684853 Length:392 Species:Mus musculus


Alignment Length:290 Identity:104/290 - (35%)
Similarity:147/290 - (50%) Gaps:27/290 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   500 TSGIET-NEISDSSIPDAGAL-GHVKTISAARSECG---VPTLARPETRIVGGKSAAFGRWPWQV 559
            |.|.:| :.|.|....:|.|| ..|..:..  .:||   :|.:|   .|||.|..||.|.|||||
Mouse   117 TVGKKTHHSILDQKTRNARALPADVSLVQV--KDCGKRAIPLIA---NRIVSGNPAAKGAWPWQV 176

  Fly   560 SVRRTSFFGFSSTHRCGGALINENWIATAGHCVDDLLISQIRIRVGEYDFSHVQEQLPYIERGVA 624
            |::|      |:.|:|||.||...|:.||.||    ..:....|.....|...... |.::|.|.
Mouse   177 SLQR------SNIHQCGGTLIGNMWVVTAAHC----FRTNSNPRQWTLSFGTTINP-PLMKRDVR 230

  Fly   625 KKVVHPKYSFLTYEYDLALVKLEQPLEFAPHVSPICLPETDSLLIGMNATV--TGWGRLSEGGTL 687
            :.::|.:|.....::|:|||:....:.|:..|..||||| .|.....|:||  ||:|.|..||..
Mouse   231 RIIMHERYRPPARDHDIALVQFSPRVTFSDEVRRICLPE-PSASFPPNSTVYITGFGALYYGGES 294

  Fly   688 PSVLQEVSVPIVSNDNCKSMFMRAGRQEFIPDIFLCAGYETGGQDSCQGDSGGPLQAKSQDGRFF 752
            .:.|:|..|.|:|||.||...:....   |.....|||:..|..|:|:|||||||..:.....::
Mouse   295 QNELREARVQIISNDICKKRHVYGNE---IKRGMFCAGFLEGNYDACRGDSGGPLVIRDNKDTWY 356

  Fly   753 LAGIISWGIGCAEANLPGVCTRISKFTPWI 782
            |.||:|||..|.:.|.|||.|:::.:..||
Mouse   357 LIGIVSWGDNCGQKNKPGVYTQVTYYRHWI 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbNP_001287355.1 Tryp_SPc 543..782 CDD:214473 89/240 (37%)
Tryp_SPc 544..785 CDD:238113 90/241 (37%)
Tmprss11aXP_006534903.1 SEA 42..135 CDD:366610 5/17 (29%)
Tryp_SPc 161..389 CDD:238113 90/241 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834002
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.