DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sb and ovch2

DIOPT Version :9

Sequence 1:NP_001287355.1 Gene:Sb / 41958 FlyBaseID:FBgn0003319 Length:787 Species:Drosophila melanogaster
Sequence 2:XP_031756362.1 Gene:ovch2 / 100496902 XenbaseID:XB-GENE-955935 Length:1023 Species:Xenopus tropicalis


Alignment Length:330 Identity:106/330 - (32%)
Similarity:164/330 - (49%) Gaps:47/330 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   476 SSSSGIVTSSQRPTQPTHRTPVLATSGIETNEISDSSIPDAGALGHVKTISAARSECGVPTLARP 540
            ::||..|...:.|.:......:|.:..:    ||.....|.|      :|..||  ||...|...
 Frog     3 TASSSFVRGMKMPRRNLLVRSILLSLAV----ISCLGEEDPG------SIRGAR--CGESPLGSA 55

  Fly   541 E-----TRIVGGKSAAFGRWPWQVSVRRTSFFGFSSTHRCGGALINENWIATAGHCVDDLLI-SQ 599
            .     :|||||:.:..|:.||.||::|      :..|.|||.|::...:.||.||:.|..: |.
 Frog    56 RDLNYLSRIVGGRESKKGQHPWTVSLKR------NGKHFCGGILVSRRHVLTASHCLLDRNVKSY 114

  Fly   600 IRIRVGEYDFS---HVQEQLPYIERGVAKKVVHPKYSFL-TYEYDLALVKLEQPLEFAPHVSPIC 660
            ||:..||||.:   ..::....||  :.|   ||.:::. ...||:|::.|:..:.|..::.|.|
 Frog   115 IRVFFGEYDQTIKEDTEQTFKVIE--IFK---HPDFNYTQPMNYDVAVLVLDGAVTFDDNIQPAC 174

  Fly   661 LPETDSLLIGMNATVT-GWGRLSEGGTLPSVLQEVSVPIVSNDNCKSMFMRAGRQEFIPDIFLCA 724
            :|..|.:....:..|| |||.|:|.|.||.|||||.:|:|:...|..: |...:...:....:||
 Frog   175 MPNPDDVFEPGDLCVTLGWGHLTENGILPGVLQEVLLPLVNLSICLDV-MATLKGAVVSSKIVCA 238

  Fly   725 GYETGGQDSCQGDSGGPLQAKSQDGRFFLAGIISWGIGCAEA---NL---------PGVCTRISK 777
            |:..||:|:|||||||||..:.:.|.:.|.|:.|||:||..:   |:         ||:.|.|.|
 Frog   239 GFPEGGKDACQGDSGGPLLCQRRHGTWVLHGLTSWGMGCGRSWKNNMFLPANRKGSPGIFTDIQK 303

  Fly   778 FTPWI 782
            ...|:
 Frog   304 LLGWV 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbNP_001287355.1 Tryp_SPc 543..782 CDD:214473 90/256 (35%)
Tryp_SPc 544..785 CDD:238113 90/257 (35%)
ovch2XP_031756362.1 Tryp_SPc 64..309 CDD:238113 90/257 (35%)
CUB 330..436 CDD:238001
CUB 447..558 CDD:238001
Tryp_SPc 606..832 CDD:238113
CUB 888..1000 CDD:238001
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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