DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sb and tmprss15

DIOPT Version :9

Sequence 1:NP_001287355.1 Gene:Sb / 41958 FlyBaseID:FBgn0003319 Length:787 Species:Drosophila melanogaster
Sequence 2:XP_031752048.1 Gene:tmprss15 / 100490249 XenbaseID:XB-GENE-999987 Length:994 Species:Xenopus tropicalis


Alignment Length:548 Identity:153/548 - (27%)
Similarity:239/548 - (43%) Gaps:119/548 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   322 PGIVN---LPMPAR----------PSKPSKPTK--KPIVYDRTPPPPPSVPPSTSTSTTSTSLIW 371
            ||..|   .|.|.|          ||....||:  :|.|...:...|.:.|       ...|.:|
 Frog   474 PGSCNESGFPEPTRVPTVPTTALLPSDCGGPTELWEPNVTFHSANYPQNYP-------NLASCVW 531

  Fly   372 PAQTHPP---QPHRPT------------RPQLSPGTSLAASSSSHWPSSTTSTTSSTTS---TTT 418
            .....|.   |.|...            |....|.:.|.|..:...|.....:|:|..|   |:.
 Frog   532 YLNAAPGKNIQLHFQVFNLENIYDVVEIRDGRGPDSLLLAVYTGSAPVKDVFSTTSAMSVYFTSD 596

  Fly   419 TTTTTRRTTTPTTTTRRTTTNKPTRPYQRPTTATSSSSTSTTSSKTPTTT--------------- 468
            :|.|.:......||..|....:|         ..|:|....:....|.|.               
 Frog   597 STGTAKGFLANYTTGLRLGMPEP---------CNSTSFQCGSGECIPNTAVCDKHRDCDDGTDER 652

  Fly   469 RPISSSSSSSSGIVTSSQRPTQPT---------------HR--------TPVLATSG-------I 503
            ..:...:||.||:|....:....|               ||        |..:.:.|       |
 Frog   653 HCVRLFNSSMSGLVQFKVQSEWHTACIDHWNEDISNDICHRLGLGNVNLTSAVLSEGNGPFVTLI 717

  Fly   504 ETNEISDSSIP-DAGALGHVKTISAARSECG---VPTLARPETRIVGGKSAAFGRWPWQVSVRRT 564
            :..:.|.|.:| |..|...|..|...:.|||   ||  .:..::||||..||.|.|||.||:.  
 Frog   718 QVEDGSLSLLPSDQCANQSVIHIQCQQRECGKRLVP--IKSGSKIVGGSDAALGAWPWIVSLY-- 778

  Fly   565 SFFGFSSTHRCGGALINENWIATAGHCV--DDLLISQIRIRVGEY-DFSHVQEQLPYIERGVAKK 626
                ::....||.:|:|:.|:.:|.|||  .:|:.|..:.|:|.: :.:..|.|:  ..:.:.:.
 Frog   779 ----YNDRQTCGASLVNQEWLVSAAHCVYGRNLIPSNWKARLGLHTNLNLTQPQI--ATQMIDQI 837

  Fly   627 VVHPKYSFLTYEYDLALVKLEQPLEFAPHVSPICLPETD-SLLIGMNATVTGWGRLSEGGTLPSV 690
            |::|:|:..|.:.|:.::.|:..:.::.::.|||||||| ...:|:|.::.||||...||.:|::
 Frog   838 VINPQYNRRTKDSDIVMMHLQFKVNYSDYIQPICLPETDQEFSVGINCSIAGWGRTQSGGPVPNI 902

  Fly   691 LQEVSVPIVSNDNCKSMFMRAGRQEF-IPDIFLCAGYETGGQDSCQGDSGGPLQAKSQDGRFFLA 754
            |||..:|::||..|:...     .|: |.|..:|.|||.||.|:||||||||:..: |:..:||.
 Frog   903 LQEAEIPLISNHKCQQQM-----PEYNITDNMVCGGYEEGGIDTCQGDSGGPMMCQ-QNNEWFLV 961

  Fly   755 GIISWGIGCAEANLPGVCTRISKFTPWI 782
            |:.|:|.|||:.:.|||..|:::||.||
 Frog   962 GVTSFGYGCAQPSRPGVYVRVTEFTNWI 989

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbNP_001287355.1 Tryp_SPc 543..782 CDD:214473 90/243 (37%)
Tryp_SPc 544..785 CDD:238113 92/244 (38%)
tmprss15XP_031752048.1 SEA 36..>103 CDD:396113
LDLa 157..190 CDD:197566
CUB 199..305 CDD:238001
MAM 321..478 CDD:395504 2/3 (67%)
CUB 501..608 CDD:395345 22/113 (19%)
LDLa 620..654 CDD:238060 4/33 (12%)
SR 655..746 CDD:214555 18/90 (20%)
Tryp_SPc 760..991 CDD:238113 92/244 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.