Sequence 1: | NP_732109.2 | Gene: | Mhcl / 41955 | FlyBaseID: | FBgn0026059 | Length: | 2194 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001119800.1 | Gene: | LNX1 / 84708 | HGNCID: | 6657 | Length: | 728 | Species: | Homo sapiens |
Alignment Length: | 624 | Identity: | 124/624 - (19%) |
---|---|---|---|
Similarity: | 194/624 - (31%) | Gaps: | 236/624 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 283 SLTDTTNSSFATPPFSLSPVGESQGIDRWARVHAFEDVELPLPPVQLVKLPPPRQ---------- 337
Fly 338 ----------LVIRRQKS------------------------PR-----QDFGFSLRKAICLDRT 363
Fly 364 ESLT--------SP--------IFRPVIFAEPGAGGGATGLLPGDRLIKVNGTPVGELPREIIIE 412
Fly 413 MI-------------------RNSGEA-------------VTVEVQPVAEL-VELSKRCMAPST- 443
Fly 444 -------------ATVEEID-------HSITNGNCNTLRR--SASKR-----------------F 469
Fly 470 KRQSRHENGN---GGGEEGGA------------------KGVGHDLEADVADASQPERVW----- 508
Fly 509 --LVHRGGFTAAIRLPTASSGRDEENKLSLRLLH-NGEQLTVDEDDVEKQNSPALDLVEDICELK 570
Fly 571 YLNEASVLHCLR-QRYASNLIHTKAGPTLLVVN-PMAPLSLYSEKVVSMFRGCKTEDMPPHVYSL 633
Fly 634 AQTAYRSLVETRRDQSLIFMGRSGSGKSTSFKHALNYLALAAGAYNNFINAEKVNALCTILEAFG 698
Fly 699 NTKTCLNSNATRMTQ-LLSLDFDQTGQIASASLQVLLPE 736 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Mhcl | NP_732109.2 | PDZ_signaling | 339..426 | CDD:238492 | 32/163 (20%) |
MYSc | 556..1317 | CDD:214580 | 40/184 (22%) | ||
MYSc_Myo18 | 575..1305 | CDD:276837 | 36/165 (22%) | ||
GBP_C | <1540..1750 | CDD:303769 | |||
COG1340 | 1565..1833 | CDD:224259 | |||
coiled coil | 1723..1734 | CDD:293879 | |||
LNX1 | NP_001119800.1 | mRING-HC-C3HC3D_LNX1 | 38..79 | CDD:319693 | |
modified RING-HC finger (C3HC3D-type) | 41..78 | CDD:319693 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 178..214 | 9/35 (26%) | |||
NPXY motif | 181..184 | 0/2 (0%) | |||
Interaction with MAGEB18. /evidence=ECO:0000269|PubMed:20864041 | 186..244 | 10/57 (18%) | |||
PDZ_signaling | 272..355 | CDD:238492 | 20/88 (23%) | ||
PDZ_signaling | 380..460 | CDD:238492 | 12/79 (15%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 475..494 | 5/18 (28%) | |||
PDZ_signaling | 505..588 | CDD:238492 | 24/105 (23%) | ||
PDZ_signaling | 637..721 | CDD:238492 | 21/104 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3528 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |