DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mhcl and Slc9a3r1

DIOPT Version :9

Sequence 1:NP_732109.2 Gene:Mhcl / 41955 FlyBaseID:FBgn0026059 Length:2194 Species:Drosophila melanogaster
Sequence 2:NP_067605.1 Gene:Slc9a3r1 / 59114 RGDID:708538 Length:356 Species:Rattus norvegicus


Alignment Length:221 Identity:51/221 - (23%)
Similarity:88/221 - (39%) Gaps:53/221 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   333 PPPRQLVIRRQKSPRQDFGFSLRKAICLDRTESLTSPIFRPVIFAEPGAGGGATGLLPGDRLIKV 397
            |.||...:  :|.| ..:||.|         ......:.:.:...|||:....:|||.||||::|
  Rat    10 PLPRLCCL--EKGP-NGYGFHL---------HGEKGKVGQFIRLVEPGSPAEKSGLLAGDRLVEV 62

  Fly   398 NGTPVGELPREIIIEMIRNSGEAVTVEV-------------QPVAELV----ELSKRCMAPSTAT 445
            ||..|.:...:.::..||.:..||.:.|             .|:.|.:    |.|:....|:.|.
  Rat    63 NGENVEKETHQQVVSRIRAALNAVRLLVVDPETDEQLKKLGVPIREELLRAQEKSEHTEPPAAAD 127

  Fly   446 VEEIDHSITNGNCNTLRRSASKRFKRQSRHENGNGGGEEGGAKGVGHDLEADVADASQPERVWLV 510
            .::.      |:.|...:|..:|.:.:.|...     .:.|..|.|.:|.   :|.|:|      
  Rat   128 TKKA------GDQNEAEKSHLERCELRPRLCT-----MKKGPNGYGFNLH---SDKSKP------ 172

  Fly   511 HRGGFTAAI--RLPTASSGRDEENKL 534
              |.|..|:  ..|..:||...::::
  Rat   173 --GQFIRAVDPDSPAEASGLRAQDRI 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MhclNP_732109.2 PDZ_signaling 339..426 CDD:238492 24/99 (24%)
MYSc 556..1317 CDD:214580
MYSc_Myo18 575..1305 CDD:276837
GBP_C <1540..1750 CDD:303769
COG1340 1565..1833 CDD:224259
coiled coil 1723..1734 CDD:293879
Slc9a3r1NP_067605.1 PDZ_signaling 12..91 CDD:238492 25/90 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 113..142 7/34 (21%)
PDZ_signaling 149..228 CDD:238492 14/64 (22%)
EBP50_C 232..356 CDD:286142
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 265..356
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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