Sequence 1: | NP_732109.2 | Gene: | Mhcl / 41955 | FlyBaseID: | FBgn0026059 | Length: | 2194 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_001920958.3 | Gene: | myo16 / 563752 | ZFINID: | ZDB-GENE-070912-470 | Length: | 1910 | Species: | Danio rerio |
Alignment Length: | 1324 | Identity: | 272/1324 - (20%) |
---|---|---|---|
Similarity: | 484/1324 - (36%) | Gaps: | 410/1324 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 225 QHGTSFTSVESLRSDGEQTGGQQRAMTLPANARY-----GALPQGNSQG-SHLHVLTSP------ 277
Fly 278 ----SPSADSLTDTTNSSFATPPFSLSPVGESQGIDRWARVHAFEDVELPLPPVQLVKLPPPRQL 338
Fly 339 VIRRQKSPRQDFGFSLRKAICLDRTESL-----TSPIFRPVIFAEPGAGGGATGLLPGDRLIKVN 398
Fly 399 GTPVGELPREIIIE---MIRNSGEAVTVEVQPVAELVELSKRCMAPSTATVEEIDHSITNGNCNT 460
Fly 461 LRRSASKRFKRQSRHENGNGGGEEGGAKGVGHDLEADVADASQPERVWLVHRGGFTAAIRLPTAS 525
Fly 526 SGRDEENKLSLRLLHNGEQLTVDEDDVEKQNSPALDLVEDICELKYLNEASVLHCLRQRYASNLI 590
Fly 591 HTKAGPTLLVVNPMAPLSLYSEKVVSMF-----RGCKTEDMPPHVYSLAQTAYRSLVETRRDQSL 650
Fly 651 IFMGRSGSGKSTSFKHALNYLALAAGAYNNFINAEKVNALCTILEAFGNTKTCLNSNATRMTQLL 715
Fly 716 SLDF-DQTGQIASASLQVLLPERQRAGRRLGHEHSFHIMTRLLAGAAGLLQKELHLENITSEDSH 779
Fly 780 PFISLSQKLEDRHRAAN-------------------DFMRTVQAFETLNIDAKAVRGIWSILAAI 825
Fly 826 YHLGIAGVTKLGTGSTARTQFANPTAARKASGLLGVNLEDLSSAAFGLTQPNAPNGGLSPSKSPT 890
Fly 891 SDTGHEWAWECLEALVI------------------GLYSEALAAVVALINRQIC----TSSHTIA 933
Fly 934 SIMLIDTPGFQN-PASCGQQVGATLADLR-HNYLQERLQMLFHHTTLVAPRDRYAQELVEIE--M 994
Fly 995 DLASECHPGPLISLIDKAPQNHVVRSSQRDLREHDRRGMLWLLDEEAIYPNSNDDTFLERLFSHY 1059
Fly 1060 GD--REHHSLLRKCA---------GPRQFVLHHLQGTNPVLYAVDGWVRHSRE-HPGIRNAVSLL 1112
Fly 1113 QDSSREEINRLYIGSLTRGSGAMVFCGSFAGLEGTQSLRRVSSIRRSFTTAGVKRN--------- 1168
Fly 1169 --------------------SIMLQVKFTVDGIIDTLRRTGTHFVHCYLLQHNAGKHTKYTANGS 1213
Fly 1214 PSSAAGQVSSEEEMVNVPLLRSQLRGSQVLEAARLHRLGFPESVPLLEFVRRFGLLAGDLASN-K 1277
Fly 1278 DVSVEQ----ILAVNELDVASYRIGPSQILFRSGVLSELEAKRDVLLSDRIIQLQAFCRGYLARK 1338
Fly 1339 KMSQR---RVQELAVRCIQRNVKAFLAVRDWPWWRLLVRVTPLLNVHRTEEQLKTANEELLMLRA 1400
Fly 1401 KLEKIECDRSEVKAENQKLEAKLS 1424 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Mhcl | NP_732109.2 | PDZ_signaling | 339..426 | CDD:238492 | 22/94 (23%) |
MYSc | 556..1317 | CDD:214580 | 189/857 (22%) | ||
MYSc_Myo18 | 575..1305 | CDD:276837 | 182/826 (22%) | ||
GBP_C | <1540..1750 | CDD:303769 | |||
COG1340 | 1565..1833 | CDD:224259 | |||
coiled coil | 1723..1734 | CDD:293879 | |||
myo16 | XP_001920958.3 | ANK | 88..186 | CDD:238125 | |
Ank_2 | 90..177 | CDD:289560 | |||
ANK repeat | 113..144 | CDD:293786 | |||
Ank_2 | 118..273 | CDD:289560 | 16/79 (20%) | ||
ANK | 141..296 | CDD:238125 | 22/120 (18%) | ||
ANK repeat | 146..207 | CDD:293786 | 1/3 (33%) | ||
ANK repeat | 242..273 | CDD:293786 | 6/32 (19%) | ||
Ank_2 | 247..329 | CDD:289560 | 20/102 (20%) | ||
ANK repeat | 275..306 | CDD:293786 | 8/48 (17%) | ||
MYSc | 424..1164 | CDD:214580 | 187/848 (22%) | ||
Motor_domain | 435..1154 | CDD:277568 | 182/826 (22%) | ||
NYAP_N | 1252..1641 | CDD:292079 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |