Sequence 1: | NP_732109.2 | Gene: | Mhcl / 41955 | FlyBaseID: | FBgn0026059 | Length: | 2194 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001101828.1 | Gene: | Lnx1 / 360926 | RGDID: | 1308159 | Length: | 728 | Species: | Rattus norvegicus |
Alignment Length: | 552 | Identity: | 109/552 - (19%) |
---|---|---|---|
Similarity: | 167/552 - (30%) | Gaps: | 205/552 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 216 AGSIGSNSSQHGTSFTSVESLRSDGE------QTGGQQRAMTLP-------------ANARYGAL 261
Fly 262 ---PQGNSQGSHLHVLTSPSPSADSLTDTTNSSFATPP------FSLSPVGESQGIDRWARVHAF 317
Fly 318 EDVELPLPPVQLVKLPPPRQLVIR---RQKSPRQDFGFSLRKAICLDRTESLTSPIFRPVIFAEP 379
Fly 380 GAGGGATGLLPGDRLIKVNGTPVGELPREIIIEMIRNSGEAVTVEVQPVAELVELSKRCMAPSTA 444
Fly 445 TVEEIDHSITNGNCNTLRRSASKRFKRQSRHENGNGGGEEGGAKGVGHDLEADVADASQPER--- 506
Fly 507 VWLVHR-------------GGFTAAIRLPTASSGRDEENKLSLRLLHNGEQLTVDEDDVEKQNSP 558
Fly 559 ALDLVEDICELKYLNEASV-LHCLRQ-RYASNLIHTKAGPTLLVVNPMAPLSLYSEKVVSMFRGC 621
Fly 622 KTEDMPPHVYSLAQTAYRSLVETRRD-QSLIFMGRSGSGKSTSFKHALNYLALAAGAYNNFINAE 685
Fly 686 KVNALCTILEAFGNTKT---CLNSNATRMTQL 714 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Mhcl | NP_732109.2 | PDZ_signaling | 339..426 | CDD:238492 | 18/89 (20%) |
MYSc | 556..1317 | CDD:214580 | 32/165 (19%) | ||
MYSc_Myo18 | 575..1305 | CDD:276837 | 27/146 (18%) | ||
GBP_C | <1540..1750 | CDD:303769 | |||
COG1340 | 1565..1833 | CDD:224259 | |||
coiled coil | 1723..1734 | CDD:293879 | |||
Lnx1 | NP_001101828.1 | RING | 45..81 | CDD:214546 | |
DegQ | <260..364 | CDD:223343 | 31/183 (17%) | ||
PDZ_signaling | 276..360 | CDD:238492 | 25/144 (17%) | ||
PDZ_signaling | 384..464 | CDD:238492 | 25/101 (25%) | ||
PDZ_signaling | 506..589 | CDD:238492 | 12/80 (15%) | ||
PDZ_signaling | 637..721 | CDD:238492 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3528 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |