Sequence 1: | NP_732109.2 | Gene: | Mhcl / 41955 | FlyBaseID: | FBgn0026059 | Length: | 2194 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006249639.1 | Gene: | Myo18b / 304551 | RGDID: | 1594542 | Length: | 2551 | Species: | Rattus norvegicus |
Alignment Length: | 2369 | Identity: | 699/2369 - (29%) |
---|---|---|---|
Similarity: | 1118/2369 - (47%) | Gaps: | 403/2369 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 FMKKSAGDEDKERRKREKKLRKEA-----------------KGTSGGPGMGGVTGVTGSMSTDEL 51
Fly 52 LRLDEVRRSLKIRGRR------------------KEKEKLPSGITADYSADFFAALNADANGGSN 98
Fly 99 GGA---VGAADPEQDRGNEEI----VASVMTHIESRASNGAGVSVNYSEVTHSLLSGGLKNRFLP 156
Fly 157 PIPPKPPKRGILKG-------SRSNMTNVHEEISFAGSAGGAGGTPEMLLRNTFQNESLYEGAAR 214
Fly 215 GAGSIGS--------------NSSQHGTSFTSVESLRSDGEQTG--GQQRAMTLPANARYGALPQ 263
Fly 264 GNSQ-------GSHLHVLTSPSPSADSLTDTTNSSFATPPFSLSPVGESQGIDRWARVHAFEDVE 321
Fly 322 LPLPPVQLVKLPPPRQLVIRRQ------------KSPRQ--DFGFSLRKAICLDRTESLTSPIFR 372
Fly 373 PVIFAEPGAGGGATGLLPGDRLIKVNGTPVGELPREIIIEMIRNSGEAVTVEVQPVAELVELSKR 437
Fly 438 CMAPSTATVEEIDHSITNGNCNTLRRSA----------SKRFKRQSRHENGNGGGEEGGAKGVGH 492
Fly 493 D--LEADVADASQPERVWLVHRGGFTAAIRLP----TAS--SGRDEENKLSLRLLHNGEQLT--V 547
Fly 548 DEDDVEKQNSPALDLVEDICELKYLNEASVLHCLRQRYASNLIHTKAGPTLLVVNPMAPLSLYSE 612
Fly 613 KVVSMFRGCKTEDMPPHVYSLAQTAYRSLVETRRDQSLIFMGRSGSGKSTSFKHALNYLALAAGA 677
Fly 678 YNNFINAEKVNALCTILEAFGNTKTCLNSNATRMTQLLSLDFDQTGQIASASLQVLLPERQRAGR 742
Fly 743 RLGHEHSFHIMTRLLAGAAGLLQKELHLENITSEDSHPFISLSQKLEDRHRAANDFMRTVQAFET 807
Fly 808 LNIDAKAVRGIWSILAAIYHLGIAGVTKLGTGSTARTQFANPTAARKASGLLGVNLEDLSSAAF- 871
Fly 872 -----------------GLTQPNAPNGGLSPSKSPTSDTGHEWAWECLEALVIGLYSEALAAVVA 919
Fly 920 LINRQICTSSHTIASIMLIDTPGFQNPASCGQQVGATLADLRHNYLQERLQMLFHHTTLVAPRDR 984
Fly 985 YAQELVEIEMDLASECHPGPLISLIDKAP-QNHVVRSSQRDLREHDRRGMLWLLDEEAIYPNSND 1048
Fly 1049 DTFLERLFSHYGDR----EHHSLLRKCAGPRQFVLHHLQGTNPVLYAVDGWVRHSREHPGIRNAV 1109
Fly 1110 SLLQDSSREEINRLYIGSLTRGSGAMVFCGSFAGLEGT--QSLRRVSSIRRSFTT--AGVKRNSI 1170
Fly 1171 MLQVKFTVDGIIDTLRRTGTHFVHCYL---LQHNAGKHTKYTANGSPSSAAGQV--SSEEEMVNV 1230
Fly 1231 PLLRSQLRGSQVLEAARLHRLGFPESVPLLEFVRRFGLLAGDLASNKDV---------SVEQILA 1286
Fly 1287 VNELDVASYRIGPSQILFRSGVLSELEAKRDVLLSDRIIQLQAFCRGYLARKKMSQRRVQELAVR 1351
Fly 1352 CIQRNVKAFLAVRDWPWWRLLVRVTPLLNVHRTEEQLKTANEELLMLRAKLEKIECDRSEVKAEN 1416
Fly 1417 QKLEAKLSELTVDLAEERSTAHIATERLEAETAERLKLEKELGDQTNKVKNLQETTEKLEMELIC 1481
Fly 1482 AKSDLNGISEDEDAENEDGVGGGV--YKLKYERVARELEFTKRRLHTQHEHDLEQLVALKKHLEM 1544
Fly 1545 KLSD---AYEEVVEQRQVVGQWKRKAQKMTNEMNDLRMLLEEQNARNNLLEKKQRKFDAE-CQSL 1605
Fly 1606 QDAVRQERQAKERYGREKDVLQAEKFTLEQTLADTRLDLEFKEEKLASLQRELEEMTFGGGTEEE 1670
Fly 1671 F-----------AQLRRSKNETERRAKEQEEELDEMAGQIQLLEQAKLRLEMTLETMRKEARRES 1724
Fly 1725 QQRDEELEEVRGNGYKKIKALECQLETEHEERTLLLREKHELERRLSSMEDR-DRVDRDAEEALN 1788
Fly 1789 QKLRRDLRKYKALLKDAQTQLERLK--ADTPGKTLIRQLRNQLEDAESARSLAMKARQTAEAELT 1851
Fly 1852 EVQAMFDESHRARNDAEERANAAHRDRAELQAQIEENEEELGELMKKYSATVKQLNTEQINVSEA 1916
Fly 1917 EFKLNEMEAERNNLKEQVAELQHRLDNVENLGDPSMAMMSKRLELRTKELESRLELEQATRARLE 1981
Fly 1982 VQVNRHKEALEKLQNEVTQSKMREMQAQDVIKKSQKSLRDMREEFHAVSSREQESLTRRKDLEKK 2046
Fly 2047 VEQMESEGAALKNDLRLALQRIADLQQAMEEEGEEELSESDESLSSVGSISDLEDR--------- 2102
Fly 2103 ---LRPVHVKRSSQQS-LNGSIGGGGGSVVSSTRTVVFEKDDNSPRITVTS-------PSSPHIH 2156
Fly 2157 KLALAAKAIPANKPDTKPAASTRMELTVP 2185 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Mhcl | NP_732109.2 | PDZ_signaling | 339..426 | CDD:238492 | 18/100 (18%) |
MYSc | 556..1317 | CDD:214580 | 296/801 (37%) | ||
MYSc_Myo18 | 575..1305 | CDD:276837 | 283/770 (37%) | ||
GBP_C | <1540..1750 | CDD:303769 | 71/224 (32%) | ||
COG1340 | 1565..1833 | CDD:224259 | 93/282 (33%) | ||
coiled coil | 1723..1734 | CDD:293879 | 4/10 (40%) | ||
Myo18b | XP_006249639.1 | MYSc | 558..1324 | CDD:214580 | 296/801 (37%) |
MYSc_Myo18 | 577..1312 | CDD:276837 | 283/770 (37%) | ||
KASH_CCD | 1390..1579 | CDD:291334 | 59/198 (30%) | ||
GBP_C | <1683..1766 | CDD:303769 | 30/82 (37%) | ||
coiled coil | 1737..1751 | CDD:293879 | 5/13 (38%) | ||
Rab5-bind | 1788..2082 | CDD:286404 | 84/304 (28%) | ||
DUF3585 | <1889..2033 | CDD:304905 | 36/145 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0161 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D23517at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm46111 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_105087 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR45615 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X3038 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
9 | 8.820 |