DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mhcl and MYO16

DIOPT Version :9

Sequence 1:NP_732109.2 Gene:Mhcl / 41955 FlyBaseID:FBgn0026059 Length:2194 Species:Drosophila melanogaster
Sequence 2:NP_001185879.1 Gene:MYO16 / 23026 HGNCID:29822 Length:1880 Species:Homo sapiens


Alignment Length:1367 Identity:284/1367 - (20%)
Similarity:512/1367 - (37%) Gaps:367/1367 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   403 GELPREIIIEMIRNSGEAVTVEVQPVAELVELSKRCMAPSTATVEEIDHSITN-GNCN------- 459
            |.:|.:..:|...:|...:|...:...:|..|.:..:....:.:.::.|.::: ||.|       
Human   181 GNIPLDYAVEGTESSSILLTYLDENGVDLTSLRQMKLQRPMSMLTDVKHFLSSGGNVNEKNDEGV 245

  Fly   460 -TLRRSASKRFKRQSRHENGNGG-------------------GEEGGAK------------GVGH 492
             .|..:.:..:|........:||                   |:....|            ....
Human   246 TLLHMACASGYKEVVSLILEHGGDLNIVDDQYWTPLHLAAKYGQTNLVKLLLMHQANPHLVNCNE 310

  Fly   493 DLEADVADASQPERVWLVHRGGFTAAIRLPTASSGRDEE--------------NKLSLRLLHNGE 543
            :..:|:|.:...|.:.|.....:...::.|.::|...:|              :|||..:|...:
Human   311 EKASDIAASEFIEEMLLKAEIAWEEKMKEPLSASTLAQEEPYEEIIHDLPVLSSKLSPLVLPIAK 375

  Fly   544 QLTVDEDDV------------EKQNS--------------------PALDLVEDICELKYLNEAS 576
            |.::.|.|:            :.|:|                    ||.:  :|:..|..||:.|
Human   376 QDSLLEKDIMFKDATKGLCKQQSQDSIPENPMMSGSTKPEQVKLMPPAPN--DDLATLSELNDGS 438

  Fly   577 VLHCLRQRYASNLIHTKAGPTLLVVNPMAPLSLYSEKVVSMF---RGCKTEDMPPHVYSLAQTAY 638
            :|:.:::|:.:|.|:|..|..||:|||...|.:||..|..::   .|.....:|||::|..:.|:
Human   439 LLYEIQKRFGNNQIYTFIGDILLLVNPYKELPIYSSMVSQLYFSSSGKLCSSLPPHLFSCVERAF 503

  Fly   639 RSLVETRRDQSLIFMGRSGSGKSTSFKHALNYLALAAGAYNNFINAEKVNALCTILEAFGNTKTC 703
            ..|...:|.|..|..|..|||||.:.|..:.:|...|||....:::...:.:| ||||||:.||.
Human   504 HQLFREQRPQCFILSGERGSGKSEASKQIIRHLTCRAGASRATLDSRFKHVVC-ILEAFGHAKTT 567

  Fly   704 LNSNATRMTQLLSLDF-DQTGQIASASLQVLLPERQR-AGRRLGHEHSFHIMTRLLAGAAGLLQK 766
            ||..::...:...|.| ::..|:..|.:...|.|:.| ..:.|| :.:|.|...|:.|.:...:.
Human   568 LNDLSSCFIKYFELQFCERKQQLTGARIYTYLLEKSRLVSQPLG-QSNFLIFYLLMDGLSAEEKY 631

  Fly   767 ELHLENITSEDSHPFISLSQKLED----RHRAANDFMRTV--QAFETLNIDAKAVRGIWSILAAI 825
            .|||.|:.   :|.:  |:|.::|    ..|:.|.....|  :|...:...:..|..::.|||||
Human   632 GLHLNNLC---AHRY--LNQTIQDDASTGERSLNREKLAVLKRALNVVGFSSLEVENLFVILAAI 691

  Fly   826 YHLGIAGVTKLGTGSTARTQFANPTAARKASGLLGVNLEDLSSAAFGLTQPNAPNGGLSPSKSPT 890
            .|||....|.|..|::|..  ::.....:.:|:|.|:.::|:||.                   |
Human   692 LHLGDIRFTALNEGNSAFV--SDLQLLEQVAGMLQVSTDELASAL-------------------T 735

  Fly   891 SDTGH------------EWAWECLEALVIGLYSEALAAVVALINRQICTSSH------TIASIML 937
            :|..:            :.|....:.|...|||...:.:|..:|.  |..|.      ....|.:
Human   736 TDIQYFKGDMIIRRHTIQIAEFFRDLLAKSLYSRLFSFLVNTMNS--CLHSQDEQKSMQTLDIGI 798

  Fly   938 IDTPGFQN-PASCGQQVGATLADLR-HNYLQERLQMLFHHTTLVAPRDRYAQELVEIEMDLASEC 1000
            :|..||:. ..:..:|:...:.:.: |:|:.|   :||.|..:         |.|:..:.:.:..
Human   799 LDIFGFEEFQKNEFEQLCVNMTNEKMHHYINE---VLFLHEQV---------ECVQEGVTMETAY 851

  Fly  1001 HPGPLISLIDKAPQNHVVRSSQRDLREHDRRGMLWLLDEEAIYPNSNDDTF---LERLFSHYGDR 1062
            .||         .||.|:     |.......|.|.|||||:....|.:..|   |:.|.......
Human   852 SPG---------NQNGVL-----DFFFQKPSGFLTLLDEESQMIWSVESNFPKKLQSLLESSNTN 902

  Fly  1063 EHHSLLRKCAG-------PRQFVLHHLQGTNPVLYAVDGWVRHSREHPGIRNAVSLLQDSSREEI 1120
            ..:|.::...|       ...|.:.|..|.  |:|.|.|.:..:::... :|.:.:::.|....|
Human   903 AVYSPMKDGNGNVALKDHGTAFTIMHYAGR--VMYDVVGAIEKNKDSLS-QNLLFVMKTSENVVI 964

  Fly  1121 NRLY------IGSLTRGSGAMVFCGSFAGL------------EGTQSLRRVSSIRRSFTTAGVKR 1167
            |.|:      .|||.....:..|.|..:.|            |....|.....:::..|:..::|
Human   965 NHLFQSKLSQTGSLVSAYPSFKFRGHKSALLSKKMTASSIIGENKNYLELSKLLKKKGTSTFLQR 1029

  Fly  1168 ------NSIMLQVKFTVDGIIDTLRRTGTHFVHCYLLQHNAGKHTKYTANGSPSSAAGQVSSEEE 1226
                  .:|..|::.::..||..|::...||:||  ::.|..|......|...|           
Human  1030 LERGDPVTIASQLRKSLMDIIGKLQKCTPHFIHC--IRPNNSKLPDTFDNFYVS----------- 1081

  Fly  1227 MVNVPLLRSQLRGSQVLEAARLHRLGFPESVPLLEFVRRFGLLAGD-LASNKDVSVEQ--ILAVN 1288
                    :||:...|||..::.|.|:|..:...:|:.|:..||.. |...|:.|..:  .|.:.
Human  1082 --------AQLQYIGVLEMVKIFRYGYPVRLSFSDFLSRYKPLADTFLREKKEQSAAERCRLVLQ 1138

  Fly  1289 ELDVASYRIGPSQILFR---SGVLSELEAKRDVLLSDRIIQLQAFCRGYLARKKMSQR---RVQE 1347
            :..:..:::|..::..:   :..|::|    .:.|..:||..|...||:|||:.:.||   |.||
Human  1139 QCKLQGWQMGVRKVFLKYWHADQLNDL----CLQLQRKIITCQKVIRGFLARQHLLQRISIRQQE 1199

  Fly  1348 LAVRCIQRNVKAFLAVRDWPWWRLLVRVTPLLNVHRTEEQ-LKTANEELLMLRAKLEKIECDRSE 1411
            :.      ::.:||                    ..||:. |||.:..::.          :.|:
Human  1200 VT------SINSFL--------------------QNTEDMGLKTYDALVIQ----------NASD 1228

  Fly  1412 VKAENQKLEAKLSELTVDLAEERSTAHIATERLEAETAERLKLEKELGDQTNKVKNLQETTEKLE 1476
            :..||.:|.::::            |....|:||                   |:|:||...|..
Human  1229 IARENDRLRSEMN------------APYHKEKLE-------------------VRNMQEEGSKRT 1262

  Fly  1477 ME------------LICAKSD---------------LNGISEDEDAEN-------------EDGV 1501
            .:            .:||..|               |:.:...:|:.:             .|  
Human  1263 DDKSGPRHFHPSSMSVCAAVDGLGQCLVGPSIWSPSLHSVFSMDDSSSLPSPRKQPPPKPKRD-- 1325

  Fly  1502 GGGVYKLKYERV------ARELEFTKRRLHTQHEHDLEQLVAL-----KKHLEMKLSDAYEEVVE 1555
            ........||.|      |||...........|..|...:..:     |:....|||.:|||:..
Human  1326 PNTRLSASYEAVSACLSAAREAANEALARPRPHSDDYSTMKKIPPRKPKRSPNTKLSGSYEEISG 1390

  Fly  1556 QR 1557
            .|
Human  1391 SR 1392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MhclNP_732109.2 PDZ_signaling 339..426 CDD:238492 5/22 (23%)
MYSc 556..1317 CDD:214580 196/851 (23%)
MYSc_Myo18 575..1305 CDD:276837 187/797 (23%)
GBP_C <1540..1750 CDD:303769 7/18 (39%)
COG1340 1565..1833 CDD:224259
coiled coil 1723..1734 CDD:293879
MYO16NP_001185879.1 ANKYR 81..332 CDD:223738 21/150 (14%)
ANK repeat 86..112 CDD:293786
ANK 89..190 CDD:238125 2/8 (25%)
ANK repeat 114..145 CDD:293786
ANK 142..297 CDD:238125 17/115 (15%)
ANK repeat 147..178 CDD:293786
ANK repeat 180..210 CDD:293786 5/28 (18%)
ANK repeat 243..274 CDD:293786 4/30 (13%)
ANK repeat 276..307 CDD:293786 2/30 (7%)
ANK repeat 309..335 CDD:293786 4/25 (16%)
MYSc 426..1165 CDD:214580 192/818 (23%)
MYSc_Myo16 437..1155 CDD:276844 187/797 (23%)
NYAP_N 1253..1590 CDD:292079 26/142 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0161
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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