Sequence 1: | NP_732109.2 | Gene: | Mhcl / 41955 | FlyBaseID: | FBgn0026059 | Length: | 2194 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_506065.2 | Gene: | myo-3 / 179676 | WormBaseID: | WBGene00003515 | Length: | 1969 | Species: | Caenorhabditis elegans |
Alignment Length: | 1869 | Identity: | 456/1869 - (24%) |
---|---|---|---|
Similarity: | 802/1869 - (42%) | Gaps: | 448/1869 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 477 NGNGGGEEG--GAKGVGHDLEADVADASQP----ERVWLVH-RGGFTAAIRLPTASSGRDEENKL 534
Fly 535 SLRLLHNGEQLTVDEDDVEKQNSPALDLVEDICELKYLNEASVLHCLRQRYASNLIHTKAGPTLL 599
Fly 600 VVNPMAPLSLYSEKVVSMFRGCKTEDMPPHVYSLAQTAYRSLVETRRDQSLIFMGRSGSGKSTSF 664
Fly 665 KHALNYLALAA------------GAYNNFINAEKVNALCTILEAFGNTKTCLNSNATRMTQLLSL 717
Fly 718 DFDQTGQIASASLQVLLPERQRAGRRLGHEHSFHIMTRLLAGAAGLLQKELHLEN-ITSEDSHPF 781
Fly 782 ISLS----QKLEDRHRAANDFMR-TVQAFETLNIDAKAVRGIWSILAAIYHLGIAGVTKLGTGST 841
Fly 842 ARTQFANPTA---ARKASGLLGVNLEDLSSAAFGLTQPNAPNGGLSPSKSPTSDTGHEWA----- 898
Fly 899 -----WECLEALVIGLYSEALAAVVALINRQI----CTSSHTIASIMLIDTPGFQNPASCGQQVG 954
Fly 955 ATLADLRH------NYLQERLQMLFHHTTLVAPRDRYAQE-----LVEIEMDLASECHPGPLISL 1008
Fly 1009 IDKAPQNHVVRSSQRDLREHDRRGMLWLLDEEAIYPNSNDDTFLERLF-SHYGDREHHSLLRKCA 1072
Fly 1073 GPR------QFVLHHLQGTNPVLYAVDGWVRHSREHPGIRNAVSLLQDSSREEINRLYIGSLTRG 1131
Fly 1132 SGAMVFCGSFAGLEGTQSLRRVSSIRRSFTTAGVKRN------SIMLQVKFTVDGIIDTLRRTGT 1190
Fly 1191 HFVHCYLLQHNAGKHTKYTANGSPSSAAGQVSSEEEMVNVPLLRSQLRGSQVLEAARLHRLGFPE 1255
Fly 1256 SVPLLEFVRRFGLLAGDLASNKDVSVEQILAVNELDV------ASYRIGPSQILFRSGVLSELEA 1314
Fly 1315 KRDVLLSDRIIQLQAFCRGYLARKKMSQRRVQELAVRCIQRNVKAFLAVRDWPWWRLLVRVTPLL 1379
Fly 1380 NVHRTEEQLKTANEELLMLRAKLEKIE--CDRSEVKAENQKLEAKLSELTVDLAEERSTAHIATE 1442
Fly 1443 RLEAETAERLKLEKELGDQTNKVKNLQETTEKLEMELICAKSDLNGISEDEDAENEDGVGGGVYK 1507
Fly 1508 LKYERVARELEFTKRRLHTQHEHDLEQLVALKKHLEMKLS------DAYEEVVEQRQVVGQWKRK 1566
Fly 1567 AQKMTNEMNDLRMLLEEQNARNNLLEKKQRKFDAECQSLQDAVRQERQAKERYGREK-------- 1623
Fly 1624 ------DVLQAEKFTLEQTLADTRLDLEFKEEKL-------ASLQRELEEMTF-GGGTEEEFAQL 1674
Fly 1675 RRSKNETERRAKEQEEELDEM-----------AGQIQL-----LEQAKLR--------------- 1708
Fly 1709 ----------LEMT--LETMRK-----EARRESQQRD-EELE-----EVRGNG--YKKIKALECQ 1748
Fly 1749 ---LETEHEERTLLLREKHELERRLSSMEDRDRVDRDAEEALNQKLRRDLRKYKALLKDAQTQLE 1810
Fly 1811 RLKADTPGKTLIRQ---------------LRNQL-EDAESARSL--------------------- 1838
Fly 1839 ----------AMKARQTAEAELTEVQ---------------AMFDESHRARNDAEERANAA---H 1875
Fly 1876 RDRAELQAQIEENEEELGELMKKYSATV---KQLNTEQINVSEAEFKLNE----MEAERNNLKEQ 1933
Fly 1934 VAELQHRLDNVENLGDPSMAMMSK---RLELRTKEL-------ESRLELEQATRARLEVQVNRHK 1988
Fly 1989 EALEKLQNEVTQSKMREMQAQDVIKKSQKSLRDMREEFHAVSSREQESLTRRKDLEKKVEQMESE 2053
Fly 2054 GAALKNDLRLAL----QRIADLQ----------QAMEEEGEEELSESDE 2088 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Mhcl | NP_732109.2 | PDZ_signaling | 339..426 | CDD:238492 | |
MYSc | 556..1317 | CDD:214580 | 202/825 (24%) | ||
MYSc_Myo18 | 575..1305 | CDD:276837 | 187/794 (24%) | ||
GBP_C | <1540..1750 | CDD:303769 | 69/296 (23%) | ||
COG1340 | 1565..1833 | CDD:224259 | 89/364 (24%) | ||
coiled coil | 1723..1734 | CDD:293879 | 5/16 (31%) | ||
myo-3 | NP_506065.2 | Myosin_N | 36..73 | CDD:280832 | 9/43 (21%) |
Myosin_head | 88..779 | CDD:278492 | 193/806 (24%) | ||
MYSc_class_II | 100..779 | CDD:276951 | 187/794 (24%) | ||
Myosin_tail_1 | 857..1937 | CDD:279860 | 210/891 (24%) | ||
DUF4795 | 932..1090 | CDD:292662 | 36/174 (21%) | ||
SPEC | 1186..1391 | CDD:295325 | 53/211 (25%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0161 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |