DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mhcl and Myh9

DIOPT Version :9

Sequence 1:NP_732109.2 Gene:Mhcl / 41955 FlyBaseID:FBgn0026059 Length:2194 Species:Drosophila melanogaster
Sequence 2:NP_071855.2 Gene:Myh9 / 17886 MGIID:107717 Length:1960 Species:Mus musculus


Alignment Length:2057 Identity:522/2057 - (25%)
Similarity:864/2057 - (42%) Gaps:560/2057 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   499 ADASQPERVWL-VHRGGFTAAIRLPTASSGRDEENKLSL-RLLHNGEQLTVDEDDVEKQNSPALD 561
            ||.:..:.||: ..:.||..|       |.::|..:.:: .|:.||:::.|::||::|.|.|...
Mouse    24 ADWAAKKLVWVPSSKNGFEPA-------SLKEEVGEEAIVELVENGKKVKVNKDDIQKMNPPKFS 81

  Fly   562 LVEDICELKYLNEASVLHCLRQRYASNLIHTKAGPTLLVVNPMAPLSLYSEKVVSMFRGCKTEDM 626
            .|||:.||..||||||||.|::||.|.||:|.:|...:|:||...|.:|||::|.|::|.|..:|
Mouse    82 KVEDMAELTCLNEASVLHNLKERYYSGLIYTYSGLFCVVINPYKNLPIYSEEIVEMYKGKKRHEM 146

  Fly   627 PPHVYSLAQTAYRSLVETRRDQSLIFMGRSGSGKSTSFKHALNYLALAAGAYNN----------F 681
            |||:|::..|||||:::.|.|||::..|.||:||:.:.|..:.|||..|.::.:          .
Mouse   147 PPHIYAITDTAYRSMMQDREDQSILCTGESGAGKTENTKKVIQYLAHVASSHKSKKDQGELERQL 211

  Fly   682 INAEKVNALCTILEAFGNTKTCLNSNATRMTQLLSLDFDQTGQIASASLQVLLPERQRAGRRLGH 746
            :.|.      .|||||||.||..|.|::|..:.:.::||..|.|..|:::..|.|:.||.|:...
Mouse   212 LQAN------PILEAFGNAKTVKNDNSSRFGKFIRINFDVNGYIVGANIETYLLEKSRAIRQAKE 270

  Fly   747 EHSFHIMTRLLAGAAGLLQKELHLENITSEDSHPFISLSQKLEDRHRAANDFMRTVQAFETLNID 811
            |.:|||...||:||...|:.:|.||   ..:.:.|:|.........:..:.|..|::|...:.|.
Mouse   271 ERTFHIFYYLLSGAGEHLKTDLLLE---PYNKYRFLSNGHVTIPGQQDKDMFQETMEAMRIMGIP 332

  Fly   812 AKAVRGIWSILAAIYHLGIAGVTKLGTGSTARTQFANPTAARKASGLLGVNLEDLSSAAFGLTQP 876
            .....|:..:::.:..||.....|  ..:|.:....:.|||:|.|.|||:|:.|.:.   |:..|
Mouse   333 EDEQMGLLRVISGVLQLGNIAFKK--ERNTDQASMPDNTAAQKVSHLLGINVTDFTR---GILTP 392

  Fly   877 NAPNGGLSPSKSPTSDTGHEWAWECLEALVIGLYSEALAAVVALINRQICTSSHTIAS-IMLIDT 940
            ....|.....|:.|.    |.|...:|||....|......:|..||:.:..:....|| |.::|.
Mouse   393 RIKVGRDYVQKAQTK----EQADFAIEALAKATYERMFRWLVLRINKALDKTKRQGASFIGILDI 453

  Fly   941 PGFQNPASCGQQVGATLADLRH------NYLQERLQMLFHHTTLVAPRDRYAQE-----LVEIEM 994
            .||:            :.||..      ||..|:||.||:||..:..::.|.:|     .::..:
Mouse   454 AGFE------------IFDLNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGL 506

  Fly   995 DLASECHPGPLISLIDK--APQNHVVRSSQRDLREHDRRGMLWLLDEEAIYPNSNDDTFLERLFS 1057
            ||.      |.|.||:|  .|.                 |:|.|||||..:|.:.|.:|:|::..
Mouse   507 DLQ------PCIDLIEKPAGPP-----------------GILALLDEECWFPKATDKSFVEKVVQ 548

  Fly  1058 HYGDREHHSLLRKCAGPRQ------FVLHHLQGTNPVLYAVDGWVRHSREHPGIRNAVSLLQDSS 1116
            ..|.   |...:|   |:|      |.:.|..|  .|.|..|.|:..:.: |...|..:||..||
Mouse   549 EQGT---HPKFQK---PKQLKDKADFCIIHYAG--KVDYKADEWLMKNMD-PLNDNIATLLHQSS 604

  Fly  1117 REEINRLYIGSLTRGSGAMVFCGSFAGLEGTQSLRRVSSIRRSFTTAGVKRNSIMLQV-KFTVDG 1180
            .:     ::..|.:....::.....||:..|.......:.:..|.|.|        |: |..:..
Mouse   605 DK-----FVSELWKDVDRIIGLDQVAGMSETALPGAFKTRKGMFRTVG--------QLYKEQLAK 656

  Fly  1181 IIDTLRRTGTHFVHCYLLQH--NAGKHTKYTANGSPSSAAGQVSSEEEMVNVPLLRSQLRGSQVL 1243
            ::.|||.|..:||.|.:..|  .|||                       ::..|:..|||.:.||
Mouse   657 LMATLRNTNPNFVRCIIPNHEKKAGK-----------------------LDPHLVLDQLRCNGVL 698

  Fly  1244 EAARLHRLGFPESVPLLEFVRRFGLLAGD-----LASNKDVSVEQILAVNELDVASYRIGPSQIL 1303
            |..|:.|.|||..|...||.:|:.:|..:     ....|...|..|.|: |||...||||.|::.
Mouse   699 EGIRICRQGFPNRVVFQEFRQRYEILTPNSIPKGFMDGKQACVLMIKAL-ELDSNLYRIGQSKVF 762

  Fly  1304 FRSGVLSELEAKRDVLLSDRIIQLQAFCRGYLARKKMSQRRVQELAVRCIQRNVKAFLAVRDWPW 1368
            ||:|||:.||.:||:.::|.||..||.||||||||..::|:.|..|::.:|||..|:|.:|:|.|
Mouse   763 FRAGVLAHLEEERDLKITDVIIGFQACCRGYLARKAFAKRQQQLTAMKVLQRNCAAYLRLRNWQW 827

  Fly  1369 WRLLVRVTPLLNVHRTEEQLKTANEELLMLRAK-------LEKIECDRSEVKAENQKLEAKL--- 1423
            |||..:|.||||..|.|::|.....||..:|.|       |.::|..:|::.||..:|:.:|   
Mouse   828 WRLFTKVKPLLNSIRHEDELLAKEAELTKVREKHLAAENRLTEMETMQSQLMAEKLQLQEQLQAE 892

  Fly  1424 SELTVDLAEE---RSTA---------HIATERLEAE-------TAERLKLEKELGDQTNKVKNLQ 1469
            :||..: |||   |.||         |....|:|.|       .||:.|:::.:.:...:::..:
Mouse   893 TELCAE-AEELRARLTAKKQELEEICHDLEARVEEEEERCQYLQAEKKKMQQNIQELEEQLEEEE 956

  Fly  1470 ETTEKLEMELICAKSDLNGISED------------------ED----------AENEDGVGGGVY 1506
            ...:||::|.:..::.|..:.||                  ||          .|.|........
Mouse   957 SARQKLQLEKVTTEAKLKKLEEDQIIMEDQNCKLAKEKKLLEDRVAEFTTNLMEEEEKSKSLAKL 1021

  Fly  1507 KLKYERVARELEFTKRRLHTQHEHDLEQLVALKKHLEMKLSDAYEEVVEQRQVVGQWKRKAQKMT 1571
            |.|:|.:..:||...||    .|...::|...::.||...:|..:::.|.:..:.:.|.:..|..
Mouse  1022 KNKHEAMITDLEERLRR----EEKQRQELEKTRRKLEGDSTDLSDQIAELQAQIAELKMQLAKKE 1082

  Fly  1572 NEMNDLRMLLEEQNARNNLLEKKQRKFDAECQSLQDAVRQERQAKERYGREK----DVLQAEKFT 1632
            .|:......:||:.|:.|:..||.|:.:.:...||:.:..||.::.:..::|    :.|:|.|..
Mouse  1083 EELQAALARVEEEAAQKNMALKKIRELETQISELQEDLESERASRNKAEKQKRDLGEELEALKTE 1147

  Fly  1633 LEQTLADTRLDLEF---KEEKLASLQRELEE-------------MTFGGGTEE---EFAQLRRSK 1678
            ||.||..|....|.   :|::::.|::.||:             .......||   :..|.:|.|
Mouse  1148 LEDTLDSTAAQQELRSKREQEVSILKKTLEDEAKTHEAQIQEMRQKHSQAVEELADQLEQTKRVK 1212

  Fly  1679 NETERRAKEQEEELDEMAGQIQLLEQ-------------------------------------AK 1706
            ...|:..:..|.|..|:|.:::.|.|                                     .|
Mouse  1213 ATLEKAKQTLENERGELANEVKALLQGKGDSEHKRKKVEAQLQELQVKFSEGERVRTELADKVTK 1277

  Fly  1707 LRLEM------------------------------TLETMRKEARRE-------SQQRD------ 1728
            |::|:                              |.|.:::|.|::       .|..|      
Mouse  1278 LQVELDSVTGLLSQSDSKSSKLTKDFSALESQLQDTQELLQEENRQKLSLSTKLKQMEDEKNSFR 1342

  Fly  1729 ---EELEEVRGNGYKKIKALECQ--------------LETEHEERTLLLREKHELERRLSS---- 1772
               ||.||.:.|..|:|..|..|              |||..|.:..|.::...|.:||..    
Mouse  1343 EQLEEEEEAKRNLEKQIATLHAQVTDMKKKMEDGVGCLETAEEAKRRLQKDLEGLSQRLEEKVAA 1407

  Fly  1773 -----------------------------------------------------MEDRDRVDRDA- 1783
                                                                 .|:|||.:.:| 
Mouse  1408 YDKLEKTKTRLQQELDDLLVDLDHQRQSVSNLEKKQKKFDQLLAEEKTISAKYAEERDRAEAEAR 1472

  Fly  1784 -------------EEALNQK------------------------------LRRDLRKYKALLKDA 1805
                         |||:.||                              |.:..|..:..:::.
Mouse  1473 EKETKALSLARALEEAMEQKAELERLNKQFRTEMEDLMSSKDDVGKSVHELEKSKRALEQQVEEM 1537

  Fly  1806 QTQLERL-------------------------KADTPG---------KTLIRQLRN---QLEDAE 1833
            :||||.|                         :.|..|         |.|:||:|.   :|||..
Mouse  1538 KTQLEELEDELQATEDAKLRLEVNLQAMKAQFERDLQGRDEQSEEKKKQLVRQVREMEAELEDER 1602

  Fly  1834 SARSLAMKARQTAEAELTEVQAMFDESHRARNDAEE---RANAAHRD-----------RAELQAQ 1884
            ..||:||.||:..|.:|.:::|..|.:::.|.:|.:   :..|..:|           |.|:.||
Mouse  1603 KQRSMAMAARKKLEMDLKDLEAHIDTANKNREEAIKQLRKLQAQMKDCMRELDDTRASREEILAQ 1667

  Fly  1885 IEENEEELGELMKKYSATVKQLNTEQINVSEAEFKLNEMEAERNNLKEQVAELQHRLDNVENLGD 1949
            .:|||::|    |...|.:.||..|   ::.||....:.:.||:.|.:::|         .:.|.
Mouse  1668 AKENEKKL----KSMEAEMIQLQEE---LAAAERAKRQAQQERDELADEIA---------NSSGK 1716

  Fly  1950 PSMAMMSK-RLELRTKELESRLELEQAT---------RARLEV-QVN-----------RHKEALE 1992
            .::|:..| |||.|..:||..||.||..         :|.|:: |:|           :::.|.:
Mouse  1717 GALALEEKRRLEARIAQLEEELEEEQGNTELINDRLKKANLQIDQINTDLNLERSHAQKNENARQ 1781

  Fly  1993 KL--QNEVTQSKMREMQA-------------QDVIKKSQKSLRDMREEFHAVSSREQESLTRRKD 2042
            :|  ||:..::|::||::             :..|.:.::.|.:..:|..|.|.:.:.:..:.||
Mouse  1782 QLERQNKELKAKLQEMESAVKSKYKASIAALEAKIAQLEEQLDNETKERQAASKQVRRTEKKLKD 1846

  Fly  2043 LEKKVEQMESEGAALKNDLRLALQRIADLQQAMEEEGEE-------------ELSESDESLSSVG 2094
            :..:||.........|:....|..|:..|::.:||..||             ||.::.|:..::.
Mouse  1847 VLLQVEDERRNAEQFKDQADKASTRLKQLKRQLEEAEEEAQRANASRRKLQRELEDATETADAMN 1911

  Fly  2095 -SISDLEDRLR----PVHVKR---------SSQQSLNGSIGG 2122
             .:|.|:::||    |..|.|         .|.:.::|...|
Mouse  1912 REVSSLKNKLRRGDLPFVVTRRIVRKGTGDCSDEEVDGKADG 1953

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MhclNP_732109.2 PDZ_signaling 339..426 CDD:238492
MYSc 556..1317 CDD:214580 240/798 (30%)
MYSc_Myo18 575..1305 CDD:276837 223/767 (29%)
GBP_C <1540..1750 CDD:303769 62/329 (19%)
COG1340 1565..1833 CDD:224259 92/525 (18%)
coiled coil 1723..1734 CDD:293879 5/26 (19%)
Myh9NP_071855.2 Mediates interaction with LIMCH1. /evidence=ECO:0000250|UniProtKB:P35579 2..838 287/919 (31%)
Myosin_N 30..68 CDD:280832 10/44 (23%)
Myosin_head 83..764 CDD:278492 231/779 (30%)
Motor_domain 95..764 CDD:277568 223/767 (29%)
Actin-binding 654..676 7/21 (33%)
Myosin_tail_1 842..1921 CDD:279860 224/1099 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1035..1057 6/25 (24%)
UBAN 1038..1149 CDD:301588 25/114 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1117..1167 13/49 (27%)
RRF <1206..1261 CDD:294170 10/54 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1327..1352 6/24 (25%)
RILP-like <1480..1587 CDD:304877 15/106 (14%)
DUF2390 <1610..1678 CDD:295281 19/71 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1768..1788 3/19 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1877..1908 7/30 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1939..1960 3/15 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0161
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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