DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mhcl and Myh8

DIOPT Version :10

Sequence 1:NP_732109.2 Gene:Mhcl / 41955 FlyBaseID:FBgn0026059 Length:2194 Species:Drosophila melanogaster
Sequence 2:XP_036012291.1 Gene:Myh8 / 17885 MGIID:1339712 Length:1966 Species:Mus musculus


Alignment Length:115 Identity:23/115 - (20%)
Similarity:39/115 - (33%) Gaps:33/115 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   490 IGGVNEVQMYFKQPGSRTTCHIENQAIGSLNLN--LGPGKCIWYAVASE------HSAKFEQLL- 545
            :||..| :|..|||......|.:...:..|...  ||        |..|      |.:|..|:| 
Mouse     2 VGGAEE-KMAAKQPPPLMKKHSQTDLVSRLKTRKILG--------VGGEDDDGEVHRSKISQVLG 57

  Fly   546 ----------MKKNLWPYDSVLWPNEEELLNWGIPVMKFIQETDDTVYVG 585
                      :...:|.:.|.:..:...::...:|     .:..|.|:.|
Mouse    58 NEIKFAVREPLGLRVWQFLSAMLFSSVAIMALALP-----DQLYDAVFDG 102

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MhclNP_732109.2 PDZ_canonical 337..426 CDD:483948
COG5022 541..2019 CDD:227355 8/56 (14%)
MYSc_Myo18 575..1305 CDD:276837 3/11 (27%)
Myh8XP_036012291.1 Myosin_N 35..79 CDD:460670 10/51 (20%)
Motor_domain 102..769 CDD:473979 1/1 (100%)
Myosin_tail_1 849..1955 CDD:460256
Blue background indicates that the domain is not in the aligned region.

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