DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mhcl and Myh1

DIOPT Version :10

Sequence 1:NP_732109.2 Gene:Mhcl / 41955 FlyBaseID:FBgn0026059 Length:2194 Species:Drosophila melanogaster
Sequence 2:NP_109604.1 Gene:Myh1 / 17879 MGIID:1339711 Length:1942 Species:Mus musculus


Alignment Length:596 Identity:118/596 - (19%)
Similarity:199/596 - (33%) Gaps:189/596 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 KTLTLPDSPSRKRKAPNDESSTFKIPKTEDPANNVEVDMKLASSESPNSNFY--VAQCMAH---- 109
            |:..:..||:.||::|:.:..          |||.          |.|..|.  |.|.:..    
Mouse   902 KSSVIKHSPTVKRESPSPQGR----------ANNT----------SENQQFLKEVVQSVLEGQGV 946

  Fly   110 ------NIHLLPENTNKETKLKILEFIKS--EDEVDCSMNLV-PLSSNRPDYMLTSGVRQILKNL 165
                  .:..|.|  |::.::.:|..:..  :.|.|....:: .:..||..|   .|:..|||..
Mouse   947 GWLNMKKVRRLLE--NEQLRVFVLSKLNRAVQSEEDAQQEVIRDVEINRKVY---KGMLDILKCT 1006

  Fly   166 VSAVENSKSKNTRGRKSKIQSNLTPINEKSECK-IIKRKNEKTPLL------------------- 210
            ||::|:|.:....|..:.:.|.|.......:.| ..|||...|..|                   
Mouse  1007 VSSLEHSYTNAGLGGMASVFSLLEIARTHYQTKDPEKRKRSPTEGLSSPGSKESPSGRMESARAA 1071

  Fly   211 -LLTVPMFLDPLTTSGTEIVKKASEWLTTGRNNVYNDKKFAFQKNTKSAVRSNFFQK---KGFEP 271
             :|.||....|..:||     |:|....|   ...|::.|.......|..:.|..||   |....
Mouse  1072 GVLLVPRIQLPPPSSG-----KSSRQFDT---RSLNEENFIASIELWSKHQDNRKQKALEKEQSG 1128

  Fly   272 LAKQKPKQSAQRAQVE---------------VFQVEPGFDLTNLETLVTSSPICIIRGL------ 315
            |.|:|......:.:||               ...|..|...::.::|.:|.|..:.|..      
Mouse  1129 LNKRKSGADGVKQRVEGGDTEEKKSQISADSGLSVTSGSQKSDTDSLASSEPPALTRSTSQDSEA 1193

  Fly   316 --------GQAVYMDFSLFDLQNVAGLDGEQVIDVRRQRSQHSTKNIKLAHTSKGSLEAAERKWN 372
                    |:.:..|   .||.:.|| ||     :..:..||       .:.|:|:|..:|.:.|
Mouse  1194 STVVSNSSGETLGAD---SDLSSTAG-DG-----LTGRHGQH-------LNLSRGTLSDSEIETN 1242

  Fly   373 DEERIVEKRTLAEYAVNYDMMEKIG-------------------------------WKCVEHAAY 406
            .....|..:|   :.:...:.|.:|                               |..:|.||.
Mouse  1243 PATSSVFGKT---HKLKPGVKEPVGVNKAAPAPPVEDVSMRIYLCEGLLGRDKSSVWDQLEDAAM 1304

  Fly   407 --------KNNFENQAGFVQEA-VDAYMKYQLPLSPTAVNGELYDRTYPLTSF-ATNVDLKEEQK 461
                    ::...:|..|.::| :||.|..:..:.......|:.||...|... ...::..|::.
Mouse  1305 ETFSLSKERSTLWDQMQFWEDAFLDAVMLEREGMGMDQGPQEMIDRYLSLGDHDRKRLEDDEDRL 1369

  Fly   462 FQPLIQELDKLPNFLKTKGGLNEYIKE--------SIG-----GVNEV----------QMYFKQP 503
            ...|:..:  :...|..|.|.|:..|:        .||     .:|||          ::..:..
Mouse  1370 LATLLHNM--IAYMLMMKVGKNDIRKKVRRLMGKSHIGLTHSQEINEVLDRLAHLSGRELSIRPS 1432

  Fly   504 GSRTTCHIENQ 514
            |||   ||:.|
Mouse  1433 GSR---HIKKQ 1440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MhclNP_732109.2 PDZ_canonical 337..426 CDD:483948 20/128 (16%)
COG5022 541..2019 CDD:227355
MYSc_Myo18 575..1305 CDD:276837
Myh1NP_109604.1 Myosin_N 33..77 CDD:460670
MYSc_Myh1_mammals 100..773 CDD:276875
Actin-binding. /evidence=ECO:0000250 662..684
Actin-binding. /evidence=ECO:0000250 764..778
Myosin_tail_1 853..1930 CDD:460256 118/596 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1156..1175 2/18 (11%)
Blue background indicates that the domain is not in the aligned region.

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