Sequence 1: | NP_732109.2 | Gene: | Mhcl / 41955 | FlyBaseID: | FBgn0026059 | Length: | 2194 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_501620.2 | Gene: | nmy-3 / 177750 | WormBaseID: | WBGene00012437 | Length: | 1464 | Species: | Caenorhabditis elegans |
Alignment Length: | 1644 | Identity: | 384/1644 - (23%) |
---|---|---|---|
Similarity: | 707/1644 - (43%) | Gaps: | 341/1644 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 543 EQLTVDEDDVEKQNS--PAL-DLVEDICELKYLNEASVLHCLRQRYASNLIHTKAGPTLLVVNPM 604
Fly 605 APLSLYSEKVVSMFRGCKTEDMPPHVYSLAQTAYRSLVETRRDQSLIFMGRSGSGKSTSFKHALN 669
Fly 670 YLALAAGAYNNFINAEKVNALCTILEAFGNTKTCLNSNATRMTQLLSLDFDQTGQIASASLQVLL 734
Fly 735 PERQRAGRRLGHEHSFHIMTRLLAGAAGLLQKELHLENITSEDSHPFISLSQKLEDRHRAAND-- 797
Fly 798 -------FMRTVQAFETLNIDAKAVRGIWSILAAIYHLGIAGVTKLGTGSTARTQFA-NPTAARK 854
Fly 855 ASGLLGVNLEDLSSAAFGLTQPN--------APNGGLSPSKSPTSDTGHEWAWECLEALVIGLYS 911
Fly 912 EALAAVVALIN--------RQICTSSHTIASIMLIDTPGFQ----NPASCGQQVGATLADLRHNY 964
Fly 965 LQERLQMLFHHTTLVAPRDRYAQELVE-IEMDLASECHPGPLISLIDKAPQNHVVRSSQRDLREH 1028
Fly 1029 DRRGMLWLLDEEAIYPNSNDDTFLERLFSHYGDR---EHHSLLRKCAGPRQFVLHHLQGTNPVLY 1090
Fly 1091 AVDGWVRHSREHPGIRNAV-SLLQDSSREEINRLY----IGSL-TRGSGAMVFCGSFAGLEGTQS 1149
Fly 1150 LRRVSSIRRSFTTAGVKRNSIMLQVKFTVDGIIDTLRRTGTHFVHCYLLQHNAGKHTKYTANGSP 1214
Fly 1215 SSAAGQVSSEEEM---VNVPLLRSQLRGSQVLEAARLHRLGFPESVPLLEFVRRFGLLAGDLASN 1276
Fly 1277 KDVSVEQ--ILAVNELDVAS--YRIGPSQILFRSGVLSELEAKRDVLLSDRIIQLQAFCRGYLAR 1337
Fly 1338 KKMSQRRVQELAVRCIQRNVKAFLAVRDWPWWRLLVRVTPLLNVHRTEEQLKTANEELLMLRAKL 1402
Fly 1403 EKIECDRSEVKAENQKLEAKLSELTVDLAEERSTAHIATERLEAETAERLKLEKELGDQTNKVKN 1467
Fly 1468 LQETTEKLEMELICAKSDLNGISEDEDAENEDGVGGGVYKLKYERVARELEFTKRRLHTQHEHDL 1532
Fly 1533 EQLVALKKHLEMKLSDAYEEVVEQRQVVGQWKRKAQKMTNEMNDLRMLLEEQNARNNLLEKKQRK 1597
Fly 1598 FDAECQSLQDAVRQERQAKERYGREKDVLQAEKFTLEQTLADTRLDLEFKEEK---------LAS 1653
Fly 1654 LQRELEEMTFGGGTEEEFAQL----RRSKNETERRAKEQEEELDEMAGQIQLLEQAKLRLEMTLE 1714
Fly 1715 TMRKEARRESQQRDEELEEVRGNGYKKIKALEC--QLETEHEERTLLLREK-HELERRLSSMEDR 1776
Fly 1777 DRVDRDAEEALNQKLRRDLRKYKALLKDAQTQLERLKADTPGKTLIRQLR-NQLEDAESARSLAM 1840
Fly 1841 KARQTAEAELTEVQAMFDESHRARNDAEERANAA-HRDRAELQAQIEENEEELGELMKKYSA--T 1902
Fly 1903 VKQLNTEQINVSEAEFKLNEMEAE---------RNNLKEQVAELQHRLDNVENLGDPSMAMMSKR 1958
Fly 1959 LELRTKELESRLELEQATRARLEVQVNRHK-----EALEKLQNEVTQSKM-----REMQAQDVIK 2013
Fly 2014 KSQKSLRDMREEFHAVSS--REQESL-----TRRKDLEKKVEQMESEGAALKNDLRLALQRIADL 2071
Fly 2072 QQAMEEEGEEELSESDESL 2090 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Mhcl | NP_732109.2 | PDZ_signaling | 339..426 | CDD:238492 | |
MYSc | 556..1317 | CDD:214580 | 200/810 (25%) | ||
MYSc_Myo18 | 575..1305 | CDD:276837 | 186/776 (24%) | ||
GBP_C | <1540..1750 | CDD:303769 | 42/224 (19%) | ||
COG1340 | 1565..1833 | CDD:224259 | 54/284 (19%) | ||
coiled coil | 1723..1734 | CDD:293879 | 3/10 (30%) | ||
nmy-3 | NP_501620.2 | MYSc_class_II | 97..747 | CDD:276951 | 186/776 (24%) |
Smc | 864..>1463 | CDD:224117 | 146/711 (21%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160156847 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0161 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.740 |