Sequence 1: | NP_732109.2 | Gene: | Mhcl / 41955 | FlyBaseID: | FBgn0026059 | Length: | 2194 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001022590.1 | Gene: | myo-6 / 176764 | WormBaseID: | WBGene00009730 | Length: | 1235 | Species: | Caenorhabditis elegans |
Alignment Length: | 1535 | Identity: | 369/1535 - (24%) |
---|---|---|---|
Similarity: | 646/1535 - (42%) | Gaps: | 395/1535 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 468 RFKRQSRHENGNGGGEEGGAKGVGHDLEADVADASQPERVWLVHRGGFTAAIRLPTASSGRDEEN 532
Fly 533 KLSLRLLHNGEQLTVDEDDVEKQNSPALDLVEDICELKYLNEASVLHCLRQRYASNLIHTKAGPT 597
Fly 598 LLVVNPMAPLSLYSEKVVSMFRGCKTEDMPPHVYSLAQTAYRSLVETRRDQSLIFMGRSGSGKST 662
Fly 663 SFKHALNYLALAAGAYNNFINAE-----KVNALCTILEAFGNTKTCLNSNATRMTQLLSLDFDQT 722
Fly 723 GQIASASLQVLLPERQRAGRRLGHEHSFHIMTRLLAGAAGLLQKELHL-ENITSEDSHPFISLSQ 786
Fly 787 KLEDRHRAANDFMRTVQAFETLNIDAKAVRGIWSILAAIYHLGIAGVTKLGTGSTART-QFANPT 850
Fly 851 AARKASGLLGVNLEDLSSAAFGLTQPNAPNGGLSPSKSPTSDTGHEWA----------WECLEAL 905
Fly 906 VIGLYSEALAAVVALINRQI-CTSSHTIASIMLIDTPGFQ----NPASCGQQVGATLADLRHNYL 965
Fly 966 QERLQMLFHHTTLVAPRDRYAQE-----LVEIEMDLASECHPGPLISLIDKAPQNHVVRSSQRDL 1025
Fly 1026 REHDRRGMLWLLDEEAIYPNSNDDTFLERLFS-HYGDREHHSLLRKCAGPR------QFVLHHLQ 1083
Fly 1084 GTNPVLYAVDGWVRHSREHPGIRNAVSLLQDSSREEINRLYIGSLTRGSGAMVFCGSFAGLEGTQ 1148
Fly 1149 SLRRVSSIRRSFTTAGVKRNS-----IMLQVKFTVDGIIDTLRRTGTHFVHCYLLQHNAGKHTKY 1208
Fly 1209 TANGSPSSAAGQVSSEEEMVNVPLLRSQLRGSQVLEAARLHRLGFPESVPLLEFVRRFGLLAGDL 1273
Fly 1274 ASNKDVS------VEQILAVNELDVASYRIGPSQILFRSGVLSELEAKRDVLLSDRIIQLQAFCR 1332
Fly 1333 GYLARKKMSQRRVQELAVRCIQRNVKAFLAVRDWPWWRLLVRVTPLLNVHRTEEQLKTANEELLM 1397
Fly 1398 LRAKLEKIECDRSEVKAENQKLEAKLSELTVDLAEERSTAHIATERLEAETAERLKLEKELGDQT 1462
Fly 1463 NKVKNLQETTEKLEMELICAKSDLNGISEDEDAENEDGVGGGVYKLKYERVARELEFTKRRLHTQ 1527
Fly 1528 HEHDLEQLVALKKHLEMKLSDAYEEVVEQRQVVGQWKRKAQKMTNEMNDLRMLLEEQNARNNLLE 1592
Fly 1593 KKQRKFDAECQSLQDAVRQERQAKERYGREKDVLQAEKFTLEQTLADTRLDLEFKEEKLASLQRE 1657
Fly 1658 LEEMTFGGGTEEEFAQLRRSKNETERRAKEQ--EEELDEMAGQIQLLEQAKLRLEMTLETMRKEA 1720
Fly 1721 RRESQQRDEEL-EEVRGNG--YKKIKALECQLETEHEERTLLLREKHELERRLSSMEDRDRVDRD 1782
Fly 1783 AE-EALNQKLRRD---LRKYKALLKDAQTQLERLKADTPGKTLIR--------QLRNQLEDAESA 1835
Fly 1836 RSLAMKARQTAEAELTEVQAMFDESHRARNDAEERANAAHRDRAELQAQIEENEEELGELMKKYS 1900
Fly 1901 ATVKQLNTEQINVSEAEFKLNEMEAERNNLKEQVAELQHR 1940 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Mhcl | NP_732109.2 | PDZ_signaling | 339..426 | CDD:238492 | |
MYSc | 556..1317 | CDD:214580 | 202/805 (25%) | ||
MYSc_Myo18 | 575..1305 | CDD:276837 | 189/774 (24%) | ||
GBP_C | <1540..1750 | CDD:303769 | 40/214 (19%) | ||
COG1340 | 1565..1833 | CDD:224259 | 62/284 (22%) | ||
coiled coil | 1723..1734 | CDD:293879 | 2/11 (18%) | ||
myo-6 | NP_001022590.1 | Myosin_N | 34..72 | CDD:367160 | 11/54 (20%) |
MYSc_class_II | 99..769 | CDD:276951 | 189/774 (24%) | ||
SbcC | <774..1178 | CDD:223496 | 137/597 (23%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |