Sequence 1: | NP_732109.2 | Gene: | Mhcl / 41955 | FlyBaseID: | FBgn0026059 | Length: | 2194 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_542985.4 | Gene: | Lnx2 / 140887 | MGIID: | 2155959 | Length: | 687 | Species: | Mus musculus |
Alignment Length: | 633 | Identity: | 117/633 - (18%) |
---|---|---|---|
Similarity: | 198/633 - (31%) | Gaps: | 232/633 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 123 HIESRASNGAGVSVNY----SEVTHSLLSGGLKNRFLPP---IPPKPPKRGILKGSRSNMTNVHE 180
Fly 181 EISFAGSAGGAGGTPEMLLRNTFQNESLYEGAARGAGSIGSNSSQHGTSFTSVESLRSDG----- 240
Fly 241 -EQTGGQQRAMTLPAN------------ARYGALPQGNSQGSHLHVLTSPSPSADSLTDTTNSSF 292
Fly 293 ATPPFSLSPVGESQGIDRWARVHAFEDVELPLPPVQLVKLPPPRQLVIRRQK------------S 345
Fly 346 PRQD-FGFSLRKAICLDRTESLTSPIFRPVIFAEPGA-------GGGAT---GLLPGDRLIKVNG 399
Fly 400 TPVGELPREIIIEMIRNSGEAVTVEV----QPVAELVELSKRCMAPSTATVEEIDHSITN----- 455
Fly 456 -----GNCNTLRRSASKRFK----RQSRHEN-----GNGGGEEGGAKGV------GHDLEA---- 496
Fly 497 -------------DVADASQPERVWLVHRGGFTAAIRLPTASSGRDEENKLSLRLLHNGEQLTVD 548
Fly 549 EDDVEKQN------SPALDLVEDICELKYLNEASVLH-C----LRQRYAS----NLI------HT 592
Fly 593 ---------------------KAGPTLLVVNPMAPLSLYSEKVVSMFR 619 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Mhcl | NP_732109.2 | PDZ_signaling | 339..426 | CDD:238492 | 29/113 (26%) |
MYSc | 556..1317 | CDD:214580 | 19/106 (18%) | ||
MYSc_Myo18 | 575..1305 | CDD:276837 | 15/81 (19%) | ||
GBP_C | <1540..1750 | CDD:303769 | |||
COG1340 | 1565..1833 | CDD:224259 | |||
coiled coil | 1723..1734 | CDD:293879 | |||
Lnx2 | NP_542985.4 | mRING-HC-C3HC3D_LNX2 | 46..90 | CDD:319694 | |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 145..175 | 4/29 (14%) | |||
NPXY motif | 207..210 | 1/2 (50%) | |||
PDZ | 229..315 | CDD:214570 | 22/129 (17%) | ||
PDZ_signaling | 336..418 | CDD:238492 | 25/86 (29%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 417..454 | 8/48 (17%) | |||
PDZ_signaling | 463..539 | CDD:238492 | 12/75 (16%) | ||
PDZ_signaling | 596..680 | CDD:238492 | 11/74 (15%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3528 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |