Sequence 1: | NP_732109.2 | Gene: | Mhcl / 41955 | FlyBaseID: | FBgn0026059 | Length: | 2194 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021326089.1 | Gene: | LOC100329748 / 100329748 | -ID: | - | Length: | 1940 | Species: | Danio rerio |
Alignment Length: | 1847 | Identity: | 456/1847 - (24%) |
---|---|---|---|
Similarity: | 806/1847 - (43%) | Gaps: | 376/1847 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 529 DEENKLSLRLLHNGEQ----------LTVDEDDVEKQNSPALDLVEDICELKYLNEASVLHCLRQ 583
Fly 584 RYASNLIHTKAGPTLLVVNPMAPLSLYSEKVVSMFRGCKTEDMPPHVYSLAQTAYRSLVETRRDQ 648
Fly 649 SLIFMGRSGSGKSTSFKHALNYLA-LAAGAYNNFINAEKVNAL------CT-ILEAFGNTKTCLN 705
Fly 706 SNATRMTQLLSLDFDQTGQIASASLQVLLPERQRAGRRLGHEHSFHIMTRLLAGAAGLLQKELHL 770
Fly 771 ENITSEDSHP----FISLSQ----KLEDRHRAANDFMRTVQAFETLNIDAKAVRGIWSILAAIYH 827
Fly 828 LGIAGVTKLGTGSTARTQFANPTA---ARKASGLLGVNLEDLSSAAFGLTQPNAPNGGLSPSKSP 889
Fly 890 TSDTGHEW---------AWECLEALVIGLYSEALAAVVALINRQICTSSHTIASIMLIDTPGFQ- 944
Fly 945 ---NPASCGQQVGATLADLRHNYLQERLQMLFHHTTLVAPRDRYAQ-----ELVEIEMDLASECH 1001
Fly 1002 PGPLISLIDKAPQNHVVRSSQRDLREHDRRGMLWLLDEEAIYPNSNDDTFLERLF-SHYGDREHH 1065
Fly 1066 SLLRKCAGPRQ--FVLHHLQGTNPVLYAVDGWVRHSREHPGIRNAVSLLQDSSREEINRLYIGSL 1128
Fly 1129 TRGSGAMVFCGSFAGLEGTQSLRRVSSIRRSFTTAGVKRNSIMLQVKFTVDGIIDTLRRTGTHFV 1193
Fly 1194 HCYLLQHNAGKHTKYTANGSPSSAAGQVSSEEEMVNVPLLRSQLRGSQVLEAARLHRLGFPESVP 1258
Fly 1259 LLEFVRRFGLL------AGDLASNKDVSVEQILAVNELDVASYRIGPSQILFRSGVLSELEAKRD 1317
Fly 1318 VLLSDRIIQLQAFCRGYLAR---KKMSQRRVQELAVRCIQRNVKAFLAVRDWPWWRLLVRVTPLL 1379
Fly 1380 NVHRTEEQLKTANEELLMLRAKLEKIECDRSEVK--------------------------AENQ- 1417
Fly 1418 --------KLEAKLSELTVDLAEERSTAHIATERLEAE-TAERLKLEKELGDQTNKVKNLQETTE 1473
Fly 1474 KLEMELICAKSDLNGISEDEDAENEDGVGGGVYKLKYERVA---------RELEFTKRRLHT--- 1526
Fly 1527 ------QHEHDLEQLVALKKHLEMKLSDA-----------YEEVVEQRQVVGQWKRKAQKMTNEM 1574
Fly 1575 NDLRMLLEEQNARNNLLEKKQRKFDAECQSLQDAVRQERQAKERYGREKDVLQAEKFTLEQTLAD 1639
Fly 1640 ----TRLDLEF---KEEKLASLQRELEEMTFG----------------GGTEEEFAQLRRSKNET 1681
Fly 1682 ERRAKEQEEELDEMAGQIQLLEQAKLRLE---MTLETMRKEARRESQQRDEELEEVRGNGYKKIK 1743
Fly 1744 ALECQLETEHEERTLLLREKHELERRLS--------SMEDRDRVDRDAEEALN------QKLRRD 1794
Fly 1795 ---LRKYKALLKDAQTQLER--LKAD-------TPGKTLIRQLRNQLEDAESARSLAMK---ARQ 1844
Fly 1845 TAEAELTEVQAMFDESHRARNDAE------ERANAA---------HRDR--AELQAQIEENEEEL 1892
Fly 1893 GELMKKYSATVKQLNTEQINV----SEAEFKLNEMEAERNNLKEQVAELQHRL----DNVENLGD 1949
Fly 1950 PSMAMMSKRLELRT--KELESRLELEQATRARLEVQVNRHKEALEK----LQNEVTQSKMREMQA 2008
Fly 2009 QDVIKKSQKSLRDMREEFHAVSSREQESLTRRKDLEKKVEQMESEGAALKNDLRLALQRIADLQQ 2073
Fly 2074 AMEE--EGEEELSES---------------DESLSSV-----------GSISDLEDRLRPVHVKR 2110
Fly 2111 SSQQSLNGSIGGGGGSVVSSTRTVVFE 2137 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Mhcl | NP_732109.2 | PDZ_signaling | 339..426 | CDD:238492 | |
MYSc | 556..1317 | CDD:214580 | 211/806 (26%) | ||
MYSc_Myo18 | 575..1305 | CDD:276837 | 199/775 (26%) | ||
GBP_C | <1540..1750 | CDD:303769 | 54/246 (22%) | ||
COG1340 | 1565..1833 | CDD:224259 | 76/319 (24%) | ||
coiled coil | 1723..1734 | CDD:293879 | 0/10 (0%) | ||
LOC100329748 | XP_021326089.1 | Myosin_N | 34..72 | CDD:308391 | 5/28 (18%) |
MYSc_class_II | 99..770 | CDD:276951 | 199/775 (26%) | ||
SMC_N | 850..1927 | CDD:330553 | 207/932 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |