DRSC/TRiP Functional Genomics Resources

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Protein Alignment msps and AT3G28155

DIOPT Version :10

Sequence 1:NP_001247129.1 Gene:msps / 41952 FlyBaseID:FBgn0027948 Length:2082 Species:Drosophila melanogaster
Sequence 2:NP_001319663.1 Gene:AT3G28155 / 822441 AraportID:AT3G28155 Length:102 Species:Arabidopsis thaliana


Alignment Length:54 Identity:15/54 - (27%)
Similarity:29/54 - (53%) Gaps:9/54 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly  1791 LMKCIWRNVKMLPERSNELNYDAVILEVHEFM----LALPSTWWQNRPSDTPMR 1840
            ::||:..|:|.:.|.:..: .|.::..:.:|:    |..|::   || ||.|.|
plant    16 VLKCLTNNIKHMREFTLAV-VDKMVAGLSDFVDATHLLKPAS---NR-SDGPTR 64

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mspsNP_001247129.1 HEAT repeat 319..350 CDD:293787
HEAT repeat 361..387 CDD:293787
HEAT repeat 398..466 CDD:293787
HEAT repeat 860..891 CDD:293787
HEAT repeat 900..929 CDD:293787
HEAT repeat 939..968 CDD:293787
AT3G28155NP_001319663.1 None
Blue background indicates that the domain is not in the aligned region.

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