DRSC/TRiP Functional Genomics Resources

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Protein Alignment msps and T08D2.8

DIOPT Version :9

Sequence 1:NP_001247129.1 Gene:msps / 41952 FlyBaseID:FBgn0027948 Length:2082 Species:Drosophila melanogaster
Sequence 2:NP_001368073.1 Gene:T08D2.8 / 353486 WormBaseID:WBGene00011613 Length:388 Species:Caenorhabditis elegans


Alignment Length:353 Identity:97/353 - (27%)
Similarity:145/353 - (41%) Gaps:86/353 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   299 LEVLEKLLTDHPKLENGEYGALVSALKKVITKDSNVVLVAMAGKCLALLAKGLAKRFSNYASACV 363
            :|:.|: ||:..|:           |.|::.||.||.:.|::.:.||.:||.....||..|....
 Worm     7 IEISER-LTEISKI-----------LMKIVEKDVNVNVGAISAQILAEIAKKSRFSFSALALRAF 59

  Fly   364 PSLLEKFKEKKPNVVTALREAIDAIYASTSLEAQQESIVESLSNKNPSVKSETALFIARALTRTQ 428
            |.:.:|.|:|...:..||.|..|....:|.|.|..|:   .||||||..:.:||||::|...:..
 Worm    60 PVVFDKLKDKNAILRDALVEFCDEAANTTPLSAYSEA---GLSNKNPQARQQTALFLSRFFAKND 121

  Fly   429 PTALNKKLLKLLTTSLVKTLNEPDPTVRDSSAEALGTLIKLMGDKAVTPLLADV--DPLKMAK-- 489
            |..:..:.:|.|...::||.|:.|..||.::...:..:.|.:|:.....|||:|  |.||..|  
 Worm   122 PKIVETEEVKQLAEHILKTSNDADKEVRKAALRIVAAVQKCLGEGVAKRLLAEVYHDKLKTEKLP 186

  Fly   490 --IKECQEKAEI------------------------KIKVAGPKK----------------ETR- 511
              |:|.:::.|.                        |.....||:                .|| 
 Worm   187 PLIEELEKEFESSASPEMLRLAKHYKIGSSSTSAPPKTAAGAPKRLSSAVAPRRAPPASAAPTRR 251

  Fly   512 ------PASAPTAKAAAPAKTVA--GSVDPKP-VTRPATT-GARKVLKKPA-----TVSGGGATS 561
                  |..|||.:|.:|...||  ..|.||| |.|||.. |..:....||     |.....||.
 Worm   252 APSPKAPVVAPTRRAPSPKAPVAPVAPVKPKPFVARPAPNFGKPRAAVAPARAPQITQRAPAATR 316

  Fly   562 APTAALKA---------GGKPLATEREI 580
            ..|:|::.         .|.|.|..:.|
 Worm   317 PATSAIRVIPIAPNVVRNGAPAAPRKPI 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mspsNP_001247129.1 HEAT repeat 319..350 CDD:293787 10/30 (33%)
HEAT repeat 361..387 CDD:293787 7/25 (28%)
HEAT repeat 398..466 CDD:293787 21/67 (31%)
HEAT repeat 860..891 CDD:293787
HEAT repeat 900..929 CDD:293787
HEAT repeat 939..968 CDD:293787
T08D2.8NP_001368073.1 YCG1 101..>165 CDD:227543 18/63 (29%)
PHA03247 <219..361 CDD:223021 33/126 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166782
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1820
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R51
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.770

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