DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jhbp4 and to

DIOPT Version :10

Sequence 1:NP_650518.1 Gene:Jhbp4 / 41948 FlyBaseID:FBgn0038394 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_524497.1 Gene:to / 43036 FlyBaseID:FBgn0039298 Length:249 Species:Drosophila melanogaster


Alignment Length:266 Identity:66/266 - (24%)
Similarity:124/266 - (46%) Gaps:40/266 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 AVSLSVFGSICLITVTHGAYTREIVNDKLPLQERPSWLQTCKRSNPNEDKCFRQLFEGCFPALAA 75
            |::.:|.  :||:.         .|:.|.|...:|     ||.   .:.:|..:|....|...:|
  Fly     3 AIAFAVV--LCLLV---------SVDAKFPEDPKP-----CKY---GDGECIMKLCNTLFSENSA 48

  Fly    76 -GIPEIGVKSFEPLNIDQVSVSKG--SGNLVLSGGFQDLVIRGPSN---ATVRRASLDL----ER 130
             |.|.:.:...:||.:|::.:|:|  |..:.::..|.|.::.|..:   ..|:....||    |.
  Fly    49 EGDPGLNLMQLDPLKVDRMVISQGESSSPVGITLTFTDNLLYGIKDQRIVKVKGFGRDLTAKHEV 113

  Fly   131 RLL--NFELELPRLRIRAKYNLKGNILLLPLVGSGDVAMALKNVHTTVYTRISLRNETRTGDEII 193
            :::  .|.|..|       ||::|.:|:||:.|:|...|.:.||...|  ..|.:...:.|:..:
  Fly   114 KIVTKTFSLVGP-------YNIQGKVLILPISGTGQSNMTMVNVRAIV--SFSGKPLVKNGETYL 169

  Fly   194 HIDEMKVGFDVGAMRIHLKNLFNGNEILAASINSFLNQNGKEVIAELRPDLELGLADIFHGLWNN 258
            .:.::|:.....:...|..|||||::.|..::|.|||:|.:.:..|....::.....::.|:...
  Fly   170 DVTDLKITMKPESSHYHFSNLFNGDKALGDNMNVFLNENSEAIYKETAKAIDRSFGKLYLGVVKG 234

  Fly   259 VFSKMP 264
            ||||:|
  Fly   235 VFSKLP 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jhbp4NP_650518.1 JHBP 42..270 CDD:214779 59/235 (25%)
toNP_524497.1 JHBP 6..245 CDD:461956 65/263 (25%)

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