DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jhbp4 and Jhbp16

DIOPT Version :10

Sequence 1:NP_650518.1 Gene:Jhbp4 / 41948 FlyBaseID:FBgn0038394 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_650976.1 Gene:Jhbp16 / 42552 FlyBaseID:FBgn0038894 Length:260 Species:Drosophila melanogaster


Alignment Length:235 Identity:56/235 - (23%)
Similarity:100/235 - (42%) Gaps:32/235 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 LQTCKRSNPNEDKCFRQLFEGCFPALAAGIPEIGVKSFEPLNIDQVSVSKGSGNLVLSGGFQDLV 112
            |..|..|:.:.::|.||:|.........|:|:..:|.|:|.:...|.:.:|....:  |.|: |:
  Fly    43 LGRCHWSDEDFNECMRQVFNDLRAYFTTGVPDYNIKPFDPHHCSYVELRRGESQGL--GSFR-LI 104

  Fly   113 IR-----GPSNATVRRASLDLERRLLNFELELPRLRIRAKYNLKGNILLLPLVGSGDVAMALKNV 172
            :|     |.:.:.|.:...|.|.:.:.:....|...:..:|.....:|...:...|...:.|.:.
  Fly   105 LRNVSEYGWARSEVTKFHADPEDQRIVYTQYFPDKSLEGEYEFAAKMLGTEMNRKGHWNLTLYDY 169

  Fly   173 HTTVYTRISLRNETRTGDEI-IHIDEMKVGFDVGAMRIHLKNLFNG---NEILAASINSFLNQNG 233
            ..|.    |:|.....|..| :|::..:    :|.|.:|::||..|   |::....||| :.|.|
  Fly   170 SQTT----SVRRIGGPGSLIKVHVEVDR----IGGMELHIENLLQGQPLNQLADGVINS-MWQLG 225

  Fly   234 ----KEVIAELRPDLELGLADIFHGLWNNVFSKMPTKLWL 269
                |.:|.||   :.....|||    |..|...|.:.:|
  Fly   226 LPFIKPMINEL---VSTAFTDIF----NESFRHFPLEKFL 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jhbp4NP_650518.1 JHBP 42..270 CDD:214779 56/235 (24%)
Jhbp16NP_650976.1 JHBP 37..259 CDD:214779 56/235 (24%)

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